Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
ACTN4O43707 MIR661-201ENST00000384842 89 ntBASIC16.93■□□□□ 0.3
ACTN4O43707 DFFBP1-201ENST00000433250 979 ntBASIC16.93■□□□□ 0.3
ACTN4O43707 EIF3FP3-201ENST00000434851 1086 ntBASIC16.93■□□□□ 0.3
ACTN4O43707 INGX-202ENST00000489074 768 ntBASIC16.93■□□□□ 0.3
ACTN4O43707 RNA5SP421-201ENST00000516864 134 ntBASIC16.93■□□□□ 0.3
ACTN4O43707 AC123567.1-201ENST00000548294 1261 ntBASIC16.93■□□□□ 0.3
ACTN4O43707 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.93■□□□□ 0.3
ACTN4O43707 CHCHD2P3-201ENST00000603038 451 ntBASIC16.93■□□□□ 0.3
ACTN4O43707 AC009118.2-201ENST00000613275 655 ntBASIC16.93■□□□□ 0.3
ACTN4O43707 AC005786.4-201ENST00000623369 682 ntBASIC16.93■□□□□ 0.3
ACTN4O43707 AC008761.3-201ENST00000624803 892 ntBASIC16.93■□□□□ 0.3
ACTN4O43707 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.93■□□□□ 0.3
ACTN4O43707 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ACTN4O43707 AC117489.1-201ENST00000625169 3217 ntBASIC16.93■□□□□ 0.3
ACTN4O43707 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
ACTN4O43707 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ACTN4O43707 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
ACTN4O43707 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
ACTN4O43707 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ACTN4O43707 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ACTN4O43707 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.93■□□□□ 0.3
ACTN4O43707 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ACTN4O43707 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
ACTN4O43707 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
ACTN4O43707 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ACTN4O43707 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ACTN4O43707 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ACTN4O43707 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC16.92■□□□□ 0.3
ACTN4O43707 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ACTN4O43707 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
ACTN4O43707 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ACTN4O43707 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ACTN4O43707 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ACTN4O43707 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC16.92■□□□□ 0.3
ACTN4O43707 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.92■□□□□ 0.3
ACTN4O43707 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ACTN4O43707 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC16.92■□□□□ 0.3
ACTN4O43707 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC16.92■□□□□ 0.3
ACTN4O43707 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.92■□□□□ 0.3
ACTN4O43707 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ACTN4O43707 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ACTN4O43707 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ACTN4O43707 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ACTN4O43707 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ACTN4O43707 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ACTN4O43707 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.92■□□□□ 0.3
ACTN4O43707 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
ACTN4O43707 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ACTN4O43707 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.92■□□□□ 0.3
ACTN4O43707 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.92■□□□□ 0.3
ACTN4O43707 KLF2P2-201ENST00000416807 1039 ntBASIC16.92■□□□□ 0.3
ACTN4O43707 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.92■□□□□ 0.3
ACTN4O43707 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.92■□□□□ 0.3
ACTN4O43707 AC104596.2-201ENST00000512793 793 ntBASIC16.92■□□□□ 0.3
ACTN4O43707 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.92■□□□□ 0.3
ACTN4O43707 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.92■□□□□ 0.3
ACTN4O43707 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
ACTN4O43707 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
ACTN4O43707 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC16.92■□□□□ 0.3
ACTN4O43707 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.92■□□□□ 0.3
ACTN4O43707 AC005252.2-201ENST00000624630 1141 ntBASIC16.92■□□□□ 0.3
ACTN4O43707 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ACTN4O43707 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC16.92■□□□□ 0.3
ACTN4O43707 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ACTN4O43707 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
ACTN4O43707 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
ACTN4O43707 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ACTN4O43707 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ACTN4O43707 PCDHA3-202ENST00000532566 4594 ntBASIC16.92■□□□□ 0.3
ACTN4O43707 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ACTN4O43707 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.92■□□□□ 0.3
ACTN4O43707 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
ACTN4O43707 AC055811.4-201ENST00000624039 1754 ntBASIC16.92■□□□□ 0.3
ACTN4O43707 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
ACTN4O43707 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ACTN4O43707 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ACTN4O43707 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
ACTN4O43707 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ACTN4O43707 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ACTN4O43707 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ACTN4O43707 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC16.91■□□□□ 0.3
ACTN4O43707 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ACTN4O43707 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
ACTN4O43707 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ACTN4O43707 LINC01230-201ENST00000625222 3017 ntBASIC16.91■□□□□ 0.3
ACTN4O43707 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.91■□□□□ 0.3
ACTN4O43707 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ACTN4O43707 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ACTN4O43707 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ACTN4O43707 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ACTN4O43707 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
ACTN4O43707 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ACTN4O43707 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.91■□□□□ 0.3
ACTN4O43707 AC022447.6-201ENST00000515522 438 ntBASIC16.91■□□□□ 0.3
ACTN4O43707 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.91■□□□□ 0.3
ACTN4O43707 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
ACTN4O43707 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ACTN4O43707 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC16.91■□□□□ 0.3
ACTN4O43707 AC132872.1-201ENST00000566986 1195 ntBASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms