Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.07■□□□□ 0
LDB2O43679 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
LDB2O43679 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LDB2O43679 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
LDB2O43679 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LDB2O43679 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.06■□□□□ 0
LDB2O43679 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
LDB2O43679 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LDB2O43679 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
LDB2O43679 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
LDB2O43679 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LDB2O43679 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.06■□□□□ 0
LDB2O43679 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.06■□□□□ 0
LDB2O43679 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
LDB2O43679 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
LDB2O43679 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.06■□□□□ 0
LDB2O43679 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
LDB2O43679 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LDB2O43679 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LDB2O43679 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
LDB2O43679 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LDB2O43679 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LDB2O43679 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LDB2O43679 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.06■□□□□ 0
LDB2O43679 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
LDB2O43679 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
LDB2O43679 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.06■□□□□ 0
LDB2O43679 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.06■□□□□ 0
LDB2O43679 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC15.06■□□□□ 0
LDB2O43679 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.06■□□□□ 0
LDB2O43679 USP32P1-208ENST00000506594 1164 ntBASIC15.06■□□□□ 0
LDB2O43679 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.06■□□□□ 0
LDB2O43679 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.06■□□□□ 0
LDB2O43679 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.06■□□□□ 0
LDB2O43679 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.06■□□□□ 0
LDB2O43679 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.06■□□□□ 0
LDB2O43679 AC132938.2-201ENST00000579188 680 ntBASIC15.06■□□□□ 0
LDB2O43679 GNRHR2-203ENST00000581100 1187 ntBASIC15.06■□□□□ 0
LDB2O43679 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
LDB2O43679 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.06■□□□□ 0
LDB2O43679 AL591163.1-201ENST00000641757 987 ntBASIC15.06■□□□□ 0
LDB2O43679 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
LDB2O43679 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.06■□□□□ 0
LDB2O43679 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
LDB2O43679 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.06■□□□□ 0
LDB2O43679 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
LDB2O43679 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.06■□□□□ 0
LDB2O43679 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.06■□□□□ 0
LDB2O43679 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.06■□□□□ 0
LDB2O43679 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.06■□□□□ 0
LDB2O43679 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
LDB2O43679 AC003102.2-201ENST00000589195 1469 ntBASIC15.06■□□□□ 0
LDB2O43679 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LDB2O43679 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.06■□□□□ 0
LDB2O43679 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
LDB2O43679 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LDB2O43679 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.06■□□□□ 0
LDB2O43679 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.06■□□□□ 0
LDB2O43679 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
LDB2O43679 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.06■□□□□ 0
LDB2O43679 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.06■□□□□ 0
LDB2O43679 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LDB2O43679 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LDB2O43679 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.05■□□□□ 0
LDB2O43679 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.05■□□□□ 0
LDB2O43679 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
LDB2O43679 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
LDB2O43679 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
LDB2O43679 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
LDB2O43679 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
LDB2O43679 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.05■□□□□ 0
LDB2O43679 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.05■□□□□ 0
LDB2O43679 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
LDB2O43679 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LDB2O43679 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.05■□□□□ -0
LDB2O43679 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.05■□□□□ -0
LDB2O43679 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.05■□□□□ -0
LDB2O43679 POM121L8P-201ENST00000417732 1281 ntBASIC15.05■□□□□ -0
LDB2O43679 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.05■□□□□ -0
LDB2O43679 POM121L9P-203ENST00000441984 1285 ntBASIC15.05■□□□□ -0
LDB2O43679 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.05■□□□□ -0
LDB2O43679 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.05■□□□□ -0
LDB2O43679 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.05■□□□□ -0
LDB2O43679 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.05■□□□□ -0
LDB2O43679 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.05■□□□□ -0
LDB2O43679 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC15.05■□□□□ -0
LDB2O43679 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
LDB2O43679 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.05■□□□□ -0
LDB2O43679 IGHV3-72-202ENST00000621503 303 ntBASIC15.05■□□□□ -0
LDB2O43679 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.05■□□□□ -0
LDB2O43679 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
LDB2O43679 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LDB2O43679 CU639417.3-201ENST00000624240 1404 ntBASIC15.05■□□□□ -0
LDB2O43679 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LDB2O43679 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LDB2O43679 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.05■□□□□ -0
LDB2O43679 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.05■□□□□ -0
LDB2O43679 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LDB2O43679 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.05■□□□□ -0
LDB2O43679 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms