Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
CDC7O00311 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC7O00311 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.83□□□□□ -0.04
CDC7O00311 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.83□□□□□ -0.04
CDC7O00311 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.83□□□□□ -0.04
CDC7O00311 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.83□□□□□ -0.04
CDC7O00311 DUX4L47-201ENST00000566374 394 ntBASIC14.83□□□□□ -0.04
CDC7O00311 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.83□□□□□ -0.04
CDC7O00311 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC7O00311 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.83□□□□□ -0.04
CDC7O00311 AL096865.1-201ENST00000606796 927 ntBASIC14.83□□□□□ -0.04
CDC7O00311 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CDC7O00311 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC7O00311 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CDC7O00311 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC7O00311 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CDC7O00311 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC7O00311 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
CDC7O00311 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.83□□□□□ -0.04
CDC7O00311 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDC7O00311 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC7O00311 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDC7O00311 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC7O00311 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.04
CDC7O00311 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.83□□□□□ -0.04
CDC7O00311 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC7O00311 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC7O00311 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.83□□□□□ -0.04
CDC7O00311 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.83□□□□□ -0.04
CDC7O00311 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC7O00311 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC7O00311 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDC7O00311 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC7O00311 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.83□□□□□ -0.04
CDC7O00311 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDC7O00311 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC7O00311 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
CDC7O00311 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC7O00311 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDC7O00311 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.82□□□□□ -0.04
CDC7O00311 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDC7O00311 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDC7O00311 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDC7O00311 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.82□□□□□ -0.04
CDC7O00311 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDC7O00311 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDC7O00311 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.82□□□□□ -0.04
CDC7O00311 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CDC7O00311 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDC7O00311 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.82□□□□□ -0.04
CDC7O00311 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDC7O00311 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDC7O00311 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDC7O00311 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDC7O00311 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDC7O00311 AC087499.6-201ENST00000411576 835 ntBASIC14.82□□□□□ -0.04
CDC7O00311 KLF2P2-201ENST00000416807 1039 ntBASIC14.82□□□□□ -0.04
CDC7O00311 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.82□□□□□ -0.04
CDC7O00311 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDC7O00311 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CDC7O00311 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.82□□□□□ -0.04
CDC7O00311 FAM207CP-201ENST00000443486 507 ntBASIC14.82□□□□□ -0.04
CDC7O00311 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.82□□□□□ -0.04
CDC7O00311 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDC7O00311 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
CDC7O00311 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.82□□□□□ -0.04
CDC7O00311 SPCS2P1-201ENST00000561636 679 ntBASIC14.82□□□□□ -0.04
CDC7O00311 CTBP2P3-201ENST00000585629 1255 ntBASIC14.82□□□□□ -0.04
CDC7O00311 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.82□□□□□ -0.04
CDC7O00311 AC133539.2-201ENST00000604757 467 ntBASIC14.82□□□□□ -0.04
CDC7O00311 AC008494.3-201ENST00000606615 944 ntBASIC14.82□□□□□ -0.04
CDC7O00311 AC005252.2-201ENST00000624630 1141 ntBASIC14.82□□□□□ -0.04
CDC7O00311 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDC7O00311 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDC7O00311 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDC7O00311 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDC7O00311 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.82□□□□□ -0.04
CDC7O00311 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
CDC7O00311 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CDC7O00311 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDC7O00311 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDC7O00311 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDC7O00311 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDC7O00311 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDC7O00311 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.81□□□□□ -0.04
CDC7O00311 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.81□□□□□ -0.04
CDC7O00311 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDC7O00311 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
CDC7O00311 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDC7O00311 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDC7O00311 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.81□□□□□ -0.04
CDC7O00311 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.81□□□□□ -0.04
CDC7O00311 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDC7O00311 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDC7O00311 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDC7O00311 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.81□□□□□ -0.04
CDC7O00311 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDC7O00311 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
CDC7O00311 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDC7O00311 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms