Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC244669.2-201ENST00000612320 853 ntBASIC14.91□□□□□ -0.02
TMX2-CTNND1H3BSU7 SNX12-206ENST00000622259 661 ntTSL 5 BASIC14.91□□□□□ -0.02
TMX2-CTNND1H3BSU7 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC14.91□□□□□ -0.02
TMX2-CTNND1H3BSU7 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.91□□□□□ -0.02
TMX2-CTNND1H3BSU7 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.91□□□□□ -0.02
TMX2-CTNND1H3BSU7 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TMX2-CTNND1H3BSU7 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.91□□□□□ -0.02
TMX2-CTNND1H3BSU7 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TMX2-CTNND1H3BSU7 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
TMX2-CTNND1H3BSU7 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TMX2-CTNND1H3BSU7 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.91□□□□□ -0.02
TMX2-CTNND1H3BSU7 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.91□□□□□ -0.02
TMX2-CTNND1H3BSU7 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TMX2-CTNND1H3BSU7 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC14.91□□□□□ -0.02
TMX2-CTNND1H3BSU7 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMX2-CTNND1H3BSU7 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
TMX2-CTNND1H3BSU7 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TMX2-CTNND1H3BSU7 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMX2-CTNND1H3BSU7 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
TMX2-CTNND1H3BSU7 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
TMX2-CTNND1H3BSU7 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
TMX2-CTNND1H3BSU7 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.9□□□□□ -0.02
TMX2-CTNND1H3BSU7 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMX2-CTNND1H3BSU7 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TMX2-CTNND1H3BSU7 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
TMX2-CTNND1H3BSU7 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TMX2-CTNND1H3BSU7 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMX2-CTNND1H3BSU7 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TMX2-CTNND1H3BSU7 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
TMX2-CTNND1H3BSU7 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.9□□□□□ -0.02
TMX2-CTNND1H3BSU7 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMX2-CTNND1H3BSU7 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMX2-CTNND1H3BSU7 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMX2-CTNND1H3BSU7 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMX2-CTNND1H3BSU7 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMX2-CTNND1H3BSU7 AC006001.1-201ENST00000325130 474 ntBASIC14.9□□□□□ -0.02
TMX2-CTNND1H3BSU7 NUS1P3-201ENST00000423502 862 ntBASIC14.9□□□□□ -0.02
TMX2-CTNND1H3BSU7 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC14.9□□□□□ -0.02
TMX2-CTNND1H3BSU7 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TMX2-CTNND1H3BSU7 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.9□□□□□ -0.02
TMX2-CTNND1H3BSU7 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.9□□□□□ -0.02
TMX2-CTNND1H3BSU7 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.9□□□□□ -0.02
TMX2-CTNND1H3BSU7 BX539320.1-201ENST00000623759 877 ntBASIC14.9□□□□□ -0.02
TMX2-CTNND1H3BSU7 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.9□□□□□ -0.02
TMX2-CTNND1H3BSU7 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.9□□□□□ -0.02
TMX2-CTNND1H3BSU7 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
TMX2-CTNND1H3BSU7 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.9□□□□□ -0.02
TMX2-CTNND1H3BSU7 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.9□□□□□ -0.02
TMX2-CTNND1H3BSU7 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMX2-CTNND1H3BSU7 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMX2-CTNND1H3BSU7 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMX2-CTNND1H3BSU7 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMX2-CTNND1H3BSU7 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TMX2-CTNND1H3BSU7 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMX2-CTNND1H3BSU7 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMX2-CTNND1H3BSU7 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMX2-CTNND1H3BSU7 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
TMX2-CTNND1H3BSU7 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
TMX2-CTNND1H3BSU7 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.9□□□□□ -0.02
TMX2-CTNND1H3BSU7 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMX2-CTNND1H3BSU7 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
TMX2-CTNND1H3BSU7 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMX2-CTNND1H3BSU7 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.89□□□□□ -0.03
TMX2-CTNND1H3BSU7 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMX2-CTNND1H3BSU7 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TMX2-CTNND1H3BSU7 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.89□□□□□ -0.03
TMX2-CTNND1H3BSU7 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMX2-CTNND1H3BSU7 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.89□□□□□ -0.03
TMX2-CTNND1H3BSU7 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.89□□□□□ -0.03
TMX2-CTNND1H3BSU7 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
TMX2-CTNND1H3BSU7 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
TMX2-CTNND1H3BSU7 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMX2-CTNND1H3BSU7 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.89□□□□□ -0.03
TMX2-CTNND1H3BSU7 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
TMX2-CTNND1H3BSU7 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMX2-CTNND1H3BSU7 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMX2-CTNND1H3BSU7 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TMX2-CTNND1H3BSU7 AL390755.1-201ENST00000623716 2027 ntBASIC14.89□□□□□ -0.03
TMX2-CTNND1H3BSU7 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMX2-CTNND1H3BSU7 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
TMX2-CTNND1H3BSU7 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMX2-CTNND1H3BSU7 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMX2-CTNND1H3BSU7 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
TMX2-CTNND1H3BSU7 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TMX2-CTNND1H3BSU7 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMX2-CTNND1H3BSU7 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
TMX2-CTNND1H3BSU7 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.89□□□□□ -0.03
TMX2-CTNND1H3BSU7 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC14.89□□□□□ -0.03
TMX2-CTNND1H3BSU7 RPL13AP20-201ENST00000459725 609 ntBASIC14.89□□□□□ -0.03
TMX2-CTNND1H3BSU7 KRT8P13-201ENST00000463294 1010 ntBASIC14.89□□□□□ -0.03
TMX2-CTNND1H3BSU7 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.89□□□□□ -0.03
TMX2-CTNND1H3BSU7 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.89□□□□□ -0.03
TMX2-CTNND1H3BSU7 EMC4-209ENST00000559421 497 ntTSL 2 BASIC14.89□□□□□ -0.03
TMX2-CTNND1H3BSU7 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14.89□□□□□ -0.03
TMX2-CTNND1H3BSU7 AC243960.2-201ENST00000600996 747 ntBASIC14.89□□□□□ -0.03
TMX2-CTNND1H3BSU7 AC084346.2-201ENST00000607097 949 ntBASIC14.89□□□□□ -0.03
TMX2-CTNND1H3BSU7 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC14.89□□□□□ -0.03
TMX2-CTNND1H3BSU7 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TMX2-CTNND1H3BSU7 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
TMX2-CTNND1H3BSU7 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms