Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 CRCP-205ENST00000431089 942 ntTSL 2 BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 KRT18P67-201ENST00000432816 1264 ntBASIC11.09□□□□□ -0.63
SMKR1H3BMG3 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 FXR1-221ENST00000491674 365 ntTSL 2 BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 TBCB-205ENST00000585746 875 ntTSL 3 BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 NKG7-205ENST00000600427 520 ntTSL 3 BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.63
SMKR1H3BMG3 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
SMKR1H3BMG3 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SMKR1H3BMG3 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SMKR1H3BMG3 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC11.08□□□□□ -0.64
SMKR1H3BMG3 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
SMKR1H3BMG3 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
SMKR1H3BMG3 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
SMKR1H3BMG3 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC11.08□□□□□ -0.64
SMKR1H3BMG3 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC11.08□□□□□ -0.64
SMKR1H3BMG3 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC11.08□□□□□ -0.64
SMKR1H3BMG3 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
SMKR1H3BMG3 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SMKR1H3BMG3 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
SMKR1H3BMG3 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
SMKR1H3BMG3 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SMKR1H3BMG3 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
SMKR1H3BMG3 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC11.08□□□□□ -0.64
SMKR1H3BMG3 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SMKR1H3BMG3 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
SMKR1H3BMG3 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC11.08□□□□□ -0.64
SMKR1H3BMG3 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SMKR1H3BMG3 KLK8-202ENST00000320838 456 ntTSL 5 BASIC11.08□□□□□ -0.64
SMKR1H3BMG3 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC11.08□□□□□ -0.64
SMKR1H3BMG3 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SMKR1H3BMG3 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC11.08□□□□□ -0.64
SMKR1H3BMG3 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC11.08□□□□□ -0.64
SMKR1H3BMG3 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SMKR1H3BMG3 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
SMKR1H3BMG3 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
SMKR1H3BMG3 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
SMKR1H3BMG3 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SMKR1H3BMG3 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SMKR1H3BMG3 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC11.08□□□□□ -0.64
SMKR1H3BMG3 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC11.08□□□□□ -0.64
SMKR1H3BMG3 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
SMKR1H3BMG3 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC11.08□□□□□ -0.64
SMKR1H3BMG3 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC11.08□□□□□ -0.64
SMKR1H3BMG3 BMF-207ENST00000559701 630 ntTSL 3 BASIC11.08□□□□□ -0.64
SMKR1H3BMG3 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC11.08□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms