Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC01546A6NGU7 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC10.62□□□□□ -0.71
LINC01546A6NGU7 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC01546A6NGU7 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC01546A6NGU7 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC01546A6NGU7 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
LINC01546A6NGU7 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
LINC01546A6NGU7 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC01546A6NGU7 RBM39-205ENST00000397370 612 ntTSL 2 BASIC10.62□□□□□ -0.71
LINC01546A6NGU7 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC10.62□□□□□ -0.71
LINC01546A6NGU7 TOMM22P5-201ENST00000416399 439 ntBASIC10.62□□□□□ -0.71
LINC01546A6NGU7 AC015922.1-201ENST00000421102 1152 ntBASIC10.62□□□□□ -0.71
LINC01546A6NGU7 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
LINC01546A6NGU7 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC01546A6NGU7 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC01546A6NGU7 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC01546A6NGU7 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC10.62□□□□□ -0.71
LINC01546A6NGU7 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC10.62□□□□□ -0.71
LINC01546A6NGU7 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC10.62□□□□□ -0.71
LINC01546A6NGU7 AC106730.1-201ENST00000566722 1090 ntBASIC10.62□□□□□ -0.71
LINC01546A6NGU7 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC10.62□□□□□ -0.71
LINC01546A6NGU7 TBCB-205ENST00000585746 875 ntTSL 3 BASIC10.62□□□□□ -0.71
LINC01546A6NGU7 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
LINC01546A6NGU7 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC10.62□□□□□ -0.71
LINC01546A6NGU7 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC10.62□□□□□ -0.71
LINC01546A6NGU7 FAM215A-202ENST00000632077 792 ntBASIC10.62□□□□□ -0.71
LINC01546A6NGU7 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC10.62□□□□□ -0.71
LINC01546A6NGU7 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
LINC01546A6NGU7 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC01546A6NGU7 F2-205ENST00000530231 1849 ntTSL 5 BASIC10.62□□□□□ -0.71
LINC01546A6NGU7 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC10.62□□□□□ -0.71
LINC01546A6NGU7 AL355102.3-201ENST00000554299 1678 ntBASIC10.62□□□□□ -0.71
LINC01546A6NGU7 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
LINC01546A6NGU7 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
LINC01546A6NGU7 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC01546A6NGU7 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC01546A6NGU7 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC01546A6NGU7 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC01546A6NGU7 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC10.62□□□□□ -0.71
LINC01546A6NGU7 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC01546A6NGU7 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC10.62□□□□□ -0.71
LINC01546A6NGU7 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC01546A6NGU7 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
LINC01546A6NGU7 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC01546A6NGU7 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
LINC01546A6NGU7 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC10.62□□□□□ -0.71
LINC01546A6NGU7 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01546A6NGU7 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01546A6NGU7 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC10.61□□□□□ -0.71
LINC01546A6NGU7 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01546A6NGU7 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01546A6NGU7 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01546A6NGU7 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01546A6NGU7 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01546A6NGU7 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC10.61□□□□□ -0.71
LINC01546A6NGU7 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01546A6NGU7 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC10.61□□□□□ -0.71
LINC01546A6NGU7 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01546A6NGU7 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01546A6NGU7 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
LINC01546A6NGU7 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC10.61□□□□□ -0.71
LINC01546A6NGU7 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01546A6NGU7 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01546A6NGU7 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC10.61□□□□□ -0.71
LINC01546A6NGU7 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01546A6NGU7 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC10.61□□□□□ -0.71
LINC01546A6NGU7 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC10.61□□□□□ -0.71
LINC01546A6NGU7 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
LINC01546A6NGU7 PTMS-202ENST00000389462 773 ntTSL 2 BASIC10.61□□□□□ -0.71
LINC01546A6NGU7 TFAMP1-201ENST00000412727 736 ntBASIC10.61□□□□□ -0.71
LINC01546A6NGU7 AC074386.1-202ENST00000463561 864 ntBASIC10.61□□□□□ -0.71
LINC01546A6NGU7 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC10.61□□□□□ -0.71
LINC01546A6NGU7 AC092910.1-201ENST00000482027 1129 ntBASIC10.61□□□□□ -0.71
LINC01546A6NGU7 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC10.61□□□□□ -0.71
LINC01546A6NGU7 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01546A6NGU7 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC10.61□□□□□ -0.71
LINC01546A6NGU7 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC10.61□□□□□ -0.71
LINC01546A6NGU7 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01546A6NGU7 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC10.61□□□□□ -0.71
LINC01546A6NGU7 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC10.61□□□□□ -0.71
LINC01546A6NGU7 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC10.61□□□□□ -0.71
LINC01546A6NGU7 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01546A6NGU7 LINC01225-203ENST00000563550 1244 ntBASIC10.61□□□□□ -0.71
LINC01546A6NGU7 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01546A6NGU7 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
LINC01546A6NGU7 RPS15-202ENST00000585665 467 ntTSL 3 BASIC10.61□□□□□ -0.71
LINC01546A6NGU7 INO80C-210ENST00000590757 595 ntTSL 2 BASIC10.61□□□□□ -0.71
LINC01546A6NGU7 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01546A6NGU7 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01546A6NGU7 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
LINC01546A6NGU7 AC084121.4-201ENST00000641598 221 ntBASIC10.61□□□□□ -0.71
LINC01546A6NGU7 AF228730.8-201ENST00000642140 221 ntBASIC10.61□□□□□ -0.71
LINC01546A6NGU7 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01546A6NGU7 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC10.61□□□□□ -0.71
LINC01546A6NGU7 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01546A6NGU7 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01546A6NGU7 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01546A6NGU7 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01546A6NGU7 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
LINC01546A6NGU7 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms