Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC13.13□□□□□ -0.31
MBD3L3A6NE82 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC13.13□□□□□ -0.31
MBD3L3A6NE82 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
MBD3L3A6NE82 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
MBD3L3A6NE82 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.13□□□□□ -0.31
MBD3L3A6NE82 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
MBD3L3A6NE82 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
MBD3L3A6NE82 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.13□□□□□ -0.31
MBD3L3A6NE82 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
MBD3L3A6NE82 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
MBD3L3A6NE82 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
MBD3L3A6NE82 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.13□□□□□ -0.31
MBD3L3A6NE82 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC13.13□□□□□ -0.31
MBD3L3A6NE82 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.13□□□□□ -0.31
MBD3L3A6NE82 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC13.13□□□□□ -0.31
MBD3L3A6NE82 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC13.13□□□□□ -0.31
MBD3L3A6NE82 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MBD3L3A6NE82 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
MBD3L3A6NE82 ACE3P-201ENST00000423435 1973 ntBASIC13.12□□□□□ -0.31
MBD3L3A6NE82 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MBD3L3A6NE82 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
MBD3L3A6NE82 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
MBD3L3A6NE82 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC13.12□□□□□ -0.31
MBD3L3A6NE82 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
MBD3L3A6NE82 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
MBD3L3A6NE82 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.12□□□□□ -0.31
MBD3L3A6NE82 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MBD3L3A6NE82 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MBD3L3A6NE82 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
MBD3L3A6NE82 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
MBD3L3A6NE82 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
MBD3L3A6NE82 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MBD3L3A6NE82 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MBD3L3A6NE82 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
MBD3L3A6NE82 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MBD3L3A6NE82 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MBD3L3A6NE82 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC13.12□□□□□ -0.31
MBD3L3A6NE82 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
MBD3L3A6NE82 AL157407.1-201ENST00000435784 904 ntBASIC13.12□□□□□ -0.31
MBD3L3A6NE82 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC13.12□□□□□ -0.31
MBD3L3A6NE82 AL133466.1-201ENST00000447582 150 ntBASIC13.12□□□□□ -0.31
MBD3L3A6NE82 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
MBD3L3A6NE82 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC13.12□□□□□ -0.31
MBD3L3A6NE82 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
MBD3L3A6NE82 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC13.12□□□□□ -0.31
MBD3L3A6NE82 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC13.12□□□□□ -0.31
MBD3L3A6NE82 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
MBD3L3A6NE82 AC245884.6-201ENST00000515672 1067 ntBASIC13.12□□□□□ -0.31
MBD3L3A6NE82 AC009779.1-201ENST00000551138 283 ntBASIC13.12□□□□□ -0.31
MBD3L3A6NE82 CHMP4BP1-201ENST00000556017 588 ntBASIC13.12□□□□□ -0.31
MBD3L3A6NE82 AL160314.3-201ENST00000556041 767 ntBASIC13.12□□□□□ -0.31
MBD3L3A6NE82 AL161670.2-201ENST00000557650 1227 ntBASIC13.12□□□□□ -0.31
MBD3L3A6NE82 AC008805.1-201ENST00000590892 364 ntBASIC13.12□□□□□ -0.31
MBD3L3A6NE82 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
MBD3L3A6NE82 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.12□□□□□ -0.31
MBD3L3A6NE82 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MBD3L3A6NE82 AC022532.1-201ENST00000624563 1728 ntBASIC13.12□□□□□ -0.31
MBD3L3A6NE82 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
MBD3L3A6NE82 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
MBD3L3A6NE82 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MBD3L3A6NE82 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MBD3L3A6NE82 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MBD3L3A6NE82 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
MBD3L3A6NE82 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC13.12□□□□□ -0.31
MBD3L3A6NE82 LINC01101-201ENST00000622953 1884 ntBASIC13.12□□□□□ -0.31
MBD3L3A6NE82 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
MBD3L3A6NE82 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
MBD3L3A6NE82 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MBD3L3A6NE82 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
MBD3L3A6NE82 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.12□□□□□ -0.31
MBD3L3A6NE82 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.12□□□□□ -0.31
MBD3L3A6NE82 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
MBD3L3A6NE82 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
MBD3L3A6NE82 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC13.12□□□□□ -0.31
MBD3L3A6NE82 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MBD3L3A6NE82 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
MBD3L3A6NE82 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
MBD3L3A6NE82 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
MBD3L3A6NE82 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
MBD3L3A6NE82 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
MBD3L3A6NE82 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.11□□□□□ -0.31
MBD3L3A6NE82 MBLAC2-202ENST00000514906 1936 ntBASIC13.11□□□□□ -0.31
MBD3L3A6NE82 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.11□□□□□ -0.31
MBD3L3A6NE82 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.11□□□□□ -0.31
MBD3L3A6NE82 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
MBD3L3A6NE82 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MBD3L3A6NE82 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
MBD3L3A6NE82 AGK-211ENST00000629555 2765 ntTSL 5 BASIC13.11□□□□□ -0.31
MBD3L3A6NE82 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.11□□□□□ -0.31
MBD3L3A6NE82 AC068587.6-202ENST00000641839 5619 ntBASIC13.11□□□□□ -0.31
MBD3L3A6NE82 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MBD3L3A6NE82 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
MBD3L3A6NE82 FAM90A7P-201ENST00000382628 1395 ntBASIC13.11□□□□□ -0.31
MBD3L3A6NE82 FAM90A23P-201ENST00000400136 1395 ntBASIC13.11□□□□□ -0.31
MBD3L3A6NE82 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MBD3L3A6NE82 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MBD3L3A6NE82 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
MBD3L3A6NE82 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.11□□□□□ -0.31
MBD3L3A6NE82 CICP6-201ENST00000457191 2729 ntBASIC13.11□□□□□ -0.31
MBD3L3A6NE82 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms