Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SHISA3A0PJX4 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
SHISA3A0PJX4 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
SHISA3A0PJX4 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SHISA3A0PJX4 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
SHISA3A0PJX4 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SHISA3A0PJX4 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SHISA3A0PJX4 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
SHISA3A0PJX4 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SHISA3A0PJX4 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SHISA3A0PJX4 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SHISA3A0PJX4 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
SHISA3A0PJX4 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
SHISA3A0PJX4 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SHISA3A0PJX4 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SHISA3A0PJX4 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SHISA3A0PJX4 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SHISA3A0PJX4 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SHISA3A0PJX4 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SHISA3A0PJX4 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.16□□□□□ -0.3
SHISA3A0PJX4 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
SHISA3A0PJX4 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SHISA3A0PJX4 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SHISA3A0PJX4 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
SHISA3A0PJX4 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
SHISA3A0PJX4 AL590627.1-203ENST00000421194 1026 ntBASIC13.16□□□□□ -0.3
SHISA3A0PJX4 HLA-K-203ENST00000430151 1046 ntBASIC13.16□□□□□ -0.3
SHISA3A0PJX4 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.16□□□□□ -0.3
SHISA3A0PJX4 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC13.16□□□□□ -0.3
SHISA3A0PJX4 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
SHISA3A0PJX4 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC13.16□□□□□ -0.3
SHISA3A0PJX4 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.16□□□□□ -0.3
SHISA3A0PJX4 GATB-205ENST00000508611 605 ntTSL 2 BASIC13.16□□□□□ -0.3
SHISA3A0PJX4 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SHISA3A0PJX4 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC13.16□□□□□ -0.3
SHISA3A0PJX4 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SHISA3A0PJX4 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.16□□□□□ -0.3
SHISA3A0PJX4 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.16□□□□□ -0.3
SHISA3A0PJX4 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC13.16□□□□□ -0.3
SHISA3A0PJX4 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.16□□□□□ -0.3
SHISA3A0PJX4 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SHISA3A0PJX4 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC13.16□□□□□ -0.3
SHISA3A0PJX4 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
SHISA3A0PJX4 AC074044.1-201ENST00000609673 707 ntBASIC13.16□□□□□ -0.3
SHISA3A0PJX4 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC13.16□□□□□ -0.3
SHISA3A0PJX4 BX640515.1-201ENST00000617215 977 ntBASIC13.16□□□□□ -0.3
SHISA3A0PJX4 AC055717.3-201ENST00000622967 595 ntBASIC13.16□□□□□ -0.3
SHISA3A0PJX4 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
SHISA3A0PJX4 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.16□□□□□ -0.3
SHISA3A0PJX4 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SHISA3A0PJX4 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.16□□□□□ -0.3
SHISA3A0PJX4 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SHISA3A0PJX4 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SHISA3A0PJX4 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.16□□□□□ -0.3
SHISA3A0PJX4 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SHISA3A0PJX4 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SHISA3A0PJX4 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.16□□□□□ -0.3
SHISA3A0PJX4 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SHISA3A0PJX4 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SHISA3A0PJX4 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SHISA3A0PJX4 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SHISA3A0PJX4 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SHISA3A0PJX4 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
SHISA3A0PJX4 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC13.16□□□□□ -0.3
SHISA3A0PJX4 AGAP10P-201ENST00000454844 2418 ntBASIC13.15□□□□□ -0.3
SHISA3A0PJX4 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
SHISA3A0PJX4 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC13.15□□□□□ -0.3
SHISA3A0PJX4 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SHISA3A0PJX4 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SHISA3A0PJX4 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC13.15□□□□□ -0.3
SHISA3A0PJX4 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SHISA3A0PJX4 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SHISA3A0PJX4 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SHISA3A0PJX4 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SHISA3A0PJX4 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SHISA3A0PJX4 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SHISA3A0PJX4 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC13.15□□□□□ -0.3
SHISA3A0PJX4 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SHISA3A0PJX4 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SHISA3A0PJX4 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
SHISA3A0PJX4 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SHISA3A0PJX4 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
SHISA3A0PJX4 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.15□□□□□ -0.3
SHISA3A0PJX4 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SHISA3A0PJX4 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
SHISA3A0PJX4 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SHISA3A0PJX4 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SHISA3A0PJX4 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC13.15□□□□□ -0.3
SHISA3A0PJX4 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC13.15□□□□□ -0.3
SHISA3A0PJX4 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC13.15□□□□□ -0.3
SHISA3A0PJX4 TOMM22P5-201ENST00000416399 439 ntBASIC13.15□□□□□ -0.3
SHISA3A0PJX4 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.15□□□□□ -0.3
SHISA3A0PJX4 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SHISA3A0PJX4 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC13.15□□□□□ -0.3
SHISA3A0PJX4 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC13.15□□□□□ -0.3
SHISA3A0PJX4 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
SHISA3A0PJX4 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SHISA3A0PJX4 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC13.15□□□□□ -0.3
SHISA3A0PJX4 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC13.15□□□□□ -0.3
SHISA3A0PJX4 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms