Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
AP4S1Q9Y587 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AP4S1Q9Y587 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.33□□□□□ -0.12
AP4S1Q9Y587 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
AP4S1Q9Y587 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC14.33□□□□□ -0.12
AP4S1Q9Y587 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC14.33□□□□□ -0.12
AP4S1Q9Y587 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AP4S1Q9Y587 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
AP4S1Q9Y587 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.33□□□□□ -0.12
AP4S1Q9Y587 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.33□□□□□ -0.12
AP4S1Q9Y587 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
AP4S1Q9Y587 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.33□□□□□ -0.12
AP4S1Q9Y587 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AP4S1Q9Y587 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.12
AP4S1Q9Y587 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
AP4S1Q9Y587 AC018665.1-201ENST00000622927 1362 ntBASIC14.33□□□□□ -0.12
AP4S1Q9Y587 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
AP4S1Q9Y587 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC14.33□□□□□ -0.12
AP4S1Q9Y587 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
AP4S1Q9Y587 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.33□□□□□ -0.12
AP4S1Q9Y587 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
AP4S1Q9Y587 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
AP4S1Q9Y587 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
AP4S1Q9Y587 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
AP4S1Q9Y587 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP4S1Q9Y587 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
AP4S1Q9Y587 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP4S1Q9Y587 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP4S1Q9Y587 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP4S1Q9Y587 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.32□□□□□ -0.12
AP4S1Q9Y587 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP4S1Q9Y587 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC14.32□□□□□ -0.12
AP4S1Q9Y587 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP4S1Q9Y587 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.32□□□□□ -0.12
AP4S1Q9Y587 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.32□□□□□ -0.12
AP4S1Q9Y587 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP4S1Q9Y587 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP4S1Q9Y587 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.32□□□□□ -0.12
AP4S1Q9Y587 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP4S1Q9Y587 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP4S1Q9Y587 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
AP4S1Q9Y587 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC14.32□□□□□ -0.12
AP4S1Q9Y587 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP4S1Q9Y587 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP4S1Q9Y587 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC14.32□□□□□ -0.12
AP4S1Q9Y587 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
AP4S1Q9Y587 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
AP4S1Q9Y587 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.32□□□□□ -0.12
AP4S1Q9Y587 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
AP4S1Q9Y587 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
AP4S1Q9Y587 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.32□□□□□ -0.12
AP4S1Q9Y587 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
AP4S1Q9Y587 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.32□□□□□ -0.12
AP4S1Q9Y587 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
AP4S1Q9Y587 AC112191.1-201ENST00000523689 701 ntBASIC14.32□□□□□ -0.12
AP4S1Q9Y587 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.32□□□□□ -0.12
AP4S1Q9Y587 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.32□□□□□ -0.12
AP4S1Q9Y587 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.32□□□□□ -0.12
AP4S1Q9Y587 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
AP4S1Q9Y587 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
AP4S1Q9Y587 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP4S1Q9Y587 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP4S1Q9Y587 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP4S1Q9Y587 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
AP4S1Q9Y587 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP4S1Q9Y587 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC14.32□□□□□ -0.12
AP4S1Q9Y587 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
AP4S1Q9Y587 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP4S1Q9Y587 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
AP4S1Q9Y587 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP4S1Q9Y587 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.32□□□□□ -0.12
AP4S1Q9Y587 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
AP4S1Q9Y587 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
AP4S1Q9Y587 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.31□□□□□ -0.12
AP4S1Q9Y587 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AP4S1Q9Y587 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AP4S1Q9Y587 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AP4S1Q9Y587 AL591122.2-201ENST00000624125 1853 ntBASIC14.31□□□□□ -0.12
AP4S1Q9Y587 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.31□□□□□ -0.12
AP4S1Q9Y587 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
AP4S1Q9Y587 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
AP4S1Q9Y587 RET-205ENST00000615310 4337 ntTSL 5 BASIC14.31□□□□□ -0.12
AP4S1Q9Y587 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
AP4S1Q9Y587 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AP4S1Q9Y587 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AP4S1Q9Y587 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AP4S1Q9Y587 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AP4S1Q9Y587 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
AP4S1Q9Y587 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
AP4S1Q9Y587 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
AP4S1Q9Y587 FO393414.2-201ENST00000405153 598 ntBASIC14.31□□□□□ -0.12
AP4S1Q9Y587 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.31□□□□□ -0.12
AP4S1Q9Y587 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.31□□□□□ -0.12
AP4S1Q9Y587 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
AP4S1Q9Y587 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.31□□□□□ -0.12
AP4S1Q9Y587 RMI2-205ENST00000576027 818 ntTSL 2 BASIC14.31□□□□□ -0.12
AP4S1Q9Y587 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
AP4S1Q9Y587 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.31□□□□□ -0.12
AP4S1Q9Y587 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
AP4S1Q9Y587 AC025181.2-201ENST00000606994 802 ntBASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms