Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF11Q9Y3C5 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF11Q9Y3C5 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
RNF11Q9Y3C5 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RNF11Q9Y3C5 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.78□□□□□ -0.04
RNF11Q9Y3C5 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF11Q9Y3C5 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF11Q9Y3C5 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF11Q9Y3C5 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
RNF11Q9Y3C5 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RNF11Q9Y3C5 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF11Q9Y3C5 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF11Q9Y3C5 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
RNF11Q9Y3C5 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RNF11Q9Y3C5 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RNF11Q9Y3C5 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.77□□□□□ -0.04
RNF11Q9Y3C5 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.77□□□□□ -0.04
RNF11Q9Y3C5 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RNF11Q9Y3C5 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RNF11Q9Y3C5 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RNF11Q9Y3C5 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RNF11Q9Y3C5 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RNF11Q9Y3C5 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RNF11Q9Y3C5 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RNF11Q9Y3C5 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
RNF11Q9Y3C5 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
RNF11Q9Y3C5 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
RNF11Q9Y3C5 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RNF11Q9Y3C5 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RNF11Q9Y3C5 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
RNF11Q9Y3C5 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.77□□□□□ -0.04
RNF11Q9Y3C5 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RNF11Q9Y3C5 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
RNF11Q9Y3C5 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RNF11Q9Y3C5 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
RNF11Q9Y3C5 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.77□□□□□ -0.05
RNF11Q9Y3C5 PMS2P2-201ENST00000425039 1128 ntBASIC14.77□□□□□ -0.05
RNF11Q9Y3C5 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.77□□□□□ -0.05
RNF11Q9Y3C5 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.77□□□□□ -0.05
RNF11Q9Y3C5 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.77□□□□□ -0.05
RNF11Q9Y3C5 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.77□□□□□ -0.05
RNF11Q9Y3C5 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RNF11Q9Y3C5 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.77□□□□□ -0.05
RNF11Q9Y3C5 AL049840.4-201ENST00000602422 811 ntBASIC14.77□□□□□ -0.05
RNF11Q9Y3C5 AC107373.2-201ENST00000607735 490 ntBASIC14.77□□□□□ -0.05
RNF11Q9Y3C5 AL662799.1-202ENST00000614205 422 ntBASIC14.77□□□□□ -0.05
RNF11Q9Y3C5 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
RNF11Q9Y3C5 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RNF11Q9Y3C5 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RNF11Q9Y3C5 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
RNF11Q9Y3C5 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RNF11Q9Y3C5 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RNF11Q9Y3C5 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
RNF11Q9Y3C5 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
RNF11Q9Y3C5 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RNF11Q9Y3C5 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RNF11Q9Y3C5 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RNF11Q9Y3C5 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
RNF11Q9Y3C5 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
RNF11Q9Y3C5 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RNF11Q9Y3C5 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
RNF11Q9Y3C5 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RNF11Q9Y3C5 AC018442.1-201ENST00000421439 2061 ntBASIC14.77□□□□□ -0.05
RNF11Q9Y3C5 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
RNF11Q9Y3C5 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RNF11Q9Y3C5 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.77□□□□□ -0.05
RNF11Q9Y3C5 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF11Q9Y3C5 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
RNF11Q9Y3C5 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
RNF11Q9Y3C5 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.76□□□□□ -0.05
RNF11Q9Y3C5 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF11Q9Y3C5 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RNF11Q9Y3C5 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RNF11Q9Y3C5 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF11Q9Y3C5 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF11Q9Y3C5 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RNF11Q9Y3C5 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF11Q9Y3C5 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.76□□□□□ -0.05
RNF11Q9Y3C5 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.76□□□□□ -0.05
RNF11Q9Y3C5 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF11Q9Y3C5 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF11Q9Y3C5 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF11Q9Y3C5 AC093525.8-201ENST00000624099 1342 ntBASIC14.76□□□□□ -0.05
RNF11Q9Y3C5 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RNF11Q9Y3C5 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.76□□□□□ -0.05
RNF11Q9Y3C5 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF11Q9Y3C5 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF11Q9Y3C5 MIR600HG-201ENST00000449175 5984 ntBASIC14.76□□□□□ -0.05
RNF11Q9Y3C5 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RNF11Q9Y3C5 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
RNF11Q9Y3C5 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.76□□□□□ -0.05
RNF11Q9Y3C5 VDAC1P7-201ENST00000462417 847 ntBASIC14.76□□□□□ -0.05
RNF11Q9Y3C5 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.76□□□□□ -0.05
RNF11Q9Y3C5 AC026410.3-201ENST00000514280 936 ntBASIC14.76□□□□□ -0.05
RNF11Q9Y3C5 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.76□□□□□ -0.05
RNF11Q9Y3C5 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.76□□□□□ -0.05
RNF11Q9Y3C5 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RNF11Q9Y3C5 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
RNF11Q9Y3C5 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.76□□□□□ -0.05
RNF11Q9Y3C5 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms