Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.14■□□□□ 0.01
NCKAP1Q9Y2A7 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.14■□□□□ 0.01
NCKAP1Q9Y2A7 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NCKAP1Q9Y2A7 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NCKAP1Q9Y2A7 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NCKAP1Q9Y2A7 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC15.14■□□□□ 0.01
NCKAP1Q9Y2A7 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
NCKAP1Q9Y2A7 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NCKAP1Q9Y2A7 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NCKAP1Q9Y2A7 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NCKAP1Q9Y2A7 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NCKAP1Q9Y2A7 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.13■□□□□ 0.01
NCKAP1Q9Y2A7 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NCKAP1Q9Y2A7 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NCKAP1Q9Y2A7 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.13■□□□□ 0.01
NCKAP1Q9Y2A7 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NCKAP1Q9Y2A7 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
NCKAP1Q9Y2A7 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NCKAP1Q9Y2A7 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
NCKAP1Q9Y2A7 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NCKAP1Q9Y2A7 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.13■□□□□ 0.01
NCKAP1Q9Y2A7 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NCKAP1Q9Y2A7 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
NCKAP1Q9Y2A7 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
NCKAP1Q9Y2A7 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.13■□□□□ 0.01
NCKAP1Q9Y2A7 SLC25A24P2-201ENST00000415059 510 ntBASIC15.13■□□□□ 0.01
NCKAP1Q9Y2A7 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
NCKAP1Q9Y2A7 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
NCKAP1Q9Y2A7 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC15.13■□□□□ 0.01
NCKAP1Q9Y2A7 FNTAP2-201ENST00000430308 634 ntBASIC15.13■□□□□ 0.01
NCKAP1Q9Y2A7 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC15.13■□□□□ 0.01
NCKAP1Q9Y2A7 AC021723.1-201ENST00000486306 515 ntBASIC15.13■□□□□ 0.01
NCKAP1Q9Y2A7 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.13■□□□□ 0.01
NCKAP1Q9Y2A7 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.13■□□□□ 0.01
NCKAP1Q9Y2A7 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NCKAP1Q9Y2A7 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
NCKAP1Q9Y2A7 KC6-205ENST00000599934 556 ntTSL 4 BASIC15.13■□□□□ 0.01
NCKAP1Q9Y2A7 KLK11-210ENST00000600362 759 ntTSL 3 BASIC15.13■□□□□ 0.01
NCKAP1Q9Y2A7 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.13■□□□□ 0.01
NCKAP1Q9Y2A7 AP001002.3-201ENST00000623482 206 ntBASIC15.13■□□□□ 0.01
NCKAP1Q9Y2A7 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.13■□□□□ 0.01
NCKAP1Q9Y2A7 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NCKAP1Q9Y2A7 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NCKAP1Q9Y2A7 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
NCKAP1Q9Y2A7 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NCKAP1Q9Y2A7 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NCKAP1Q9Y2A7 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NCKAP1Q9Y2A7 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
NCKAP1Q9Y2A7 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NCKAP1Q9Y2A7 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
NCKAP1Q9Y2A7 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NCKAP1Q9Y2A7 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NCKAP1Q9Y2A7 AC090616.6-203ENST00000579186 1945 ntBASIC15.13■□□□□ 0.01
NCKAP1Q9Y2A7 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NCKAP1Q9Y2A7 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NCKAP1Q9Y2A7 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NCKAP1Q9Y2A7 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NCKAP1Q9Y2A7 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
NCKAP1Q9Y2A7 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
NCKAP1Q9Y2A7 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCKAP1Q9Y2A7 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCKAP1Q9Y2A7 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.12■□□□□ 0.01
NCKAP1Q9Y2A7 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
NCKAP1Q9Y2A7 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCKAP1Q9Y2A7 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NCKAP1Q9Y2A7 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.12■□□□□ 0.01
NCKAP1Q9Y2A7 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.12■□□□□ 0.01
NCKAP1Q9Y2A7 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCKAP1Q9Y2A7 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCKAP1Q9Y2A7 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
NCKAP1Q9Y2A7 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCKAP1Q9Y2A7 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.12■□□□□ 0.01
NCKAP1Q9Y2A7 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
NCKAP1Q9Y2A7 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.12■□□□□ 0.01
NCKAP1Q9Y2A7 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.12■□□□□ 0.01
NCKAP1Q9Y2A7 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
NCKAP1Q9Y2A7 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.12■□□□□ 0.01
NCKAP1Q9Y2A7 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCKAP1Q9Y2A7 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCKAP1Q9Y2A7 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NCKAP1Q9Y2A7 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
NCKAP1Q9Y2A7 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NCKAP1Q9Y2A7 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC15.12■□□□□ 0.01
NCKAP1Q9Y2A7 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.12■□□□□ 0.01
NCKAP1Q9Y2A7 CHMP1AP1-201ENST00000445563 662 ntBASIC15.12■□□□□ 0.01
NCKAP1Q9Y2A7 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC15.12■□□□□ 0.01
NCKAP1Q9Y2A7 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NCKAP1Q9Y2A7 HIST2H2BB-201ENST00000449108 381 ntBASIC15.12■□□□□ 0.01
NCKAP1Q9Y2A7 AC026434.2-201ENST00000506094 1078 ntBASIC15.12■□□□□ 0.01
NCKAP1Q9Y2A7 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.12■□□□□ 0.01
NCKAP1Q9Y2A7 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC15.12■□□□□ 0.01
NCKAP1Q9Y2A7 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NCKAP1Q9Y2A7 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
NCKAP1Q9Y2A7 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCKAP1Q9Y2A7 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCKAP1Q9Y2A7 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCKAP1Q9Y2A7 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NCKAP1Q9Y2A7 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCKAP1Q9Y2A7 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCKAP1Q9Y2A7 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms