Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.98□□□□□ -0.17
NPIPA1Q9UND3 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPA1Q9UND3 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.98□□□□□ -0.17
NPIPA1Q9UND3 NME6-203ENST00000415644 849 ntTSL 2 BASIC13.98□□□□□ -0.17
NPIPA1Q9UND3 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPA1Q9UND3 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.98□□□□□ -0.17
NPIPA1Q9UND3 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.98□□□□□ -0.17
NPIPA1Q9UND3 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.98□□□□□ -0.17
NPIPA1Q9UND3 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.98□□□□□ -0.17
NPIPA1Q9UND3 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPA1Q9UND3 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPA1Q9UND3 RIT1-205ENST00000539040 919 ntTSL 2 BASIC13.98□□□□□ -0.17
NPIPA1Q9UND3 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.98□□□□□ -0.17
NPIPA1Q9UND3 AC023310.1-201ENST00000554836 735 ntBASIC13.98□□□□□ -0.17
NPIPA1Q9UND3 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC13.98□□□□□ -0.17
NPIPA1Q9UND3 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC13.98□□□□□ -0.17
NPIPA1Q9UND3 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC13.98□□□□□ -0.17
NPIPA1Q9UND3 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.98□□□□□ -0.17
NPIPA1Q9UND3 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPA1Q9UND3 MIR6787-201ENST00000616675 61 ntBASIC13.98□□□□□ -0.17
NPIPA1Q9UND3 AC138951.2-201ENST00000623455 1161 ntBASIC13.98□□□□□ -0.17
NPIPA1Q9UND3 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPA1Q9UND3 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.98□□□□□ -0.17
NPIPA1Q9UND3 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
NPIPA1Q9UND3 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.98□□□□□ -0.17
NPIPA1Q9UND3 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPA1Q9UND3 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPA1Q9UND3 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
NPIPA1Q9UND3 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
NPIPA1Q9UND3 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPA1Q9UND3 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPA1Q9UND3 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPA1Q9UND3 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPA1Q9UND3 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPA1Q9UND3 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.98□□□□□ -0.17
NPIPA1Q9UND3 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPA1Q9UND3 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPA1Q9UND3 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
NPIPA1Q9UND3 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
NPIPA1Q9UND3 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPA1Q9UND3 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPA1Q9UND3 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC13.97□□□□□ -0.17
NPIPA1Q9UND3 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.97□□□□□ -0.17
NPIPA1Q9UND3 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPA1Q9UND3 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPA1Q9UND3 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPA1Q9UND3 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.97□□□□□ -0.17
NPIPA1Q9UND3 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.97□□□□□ -0.17
NPIPA1Q9UND3 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPA1Q9UND3 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPA1Q9UND3 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.97□□□□□ -0.17
NPIPA1Q9UND3 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
NPIPA1Q9UND3 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPA1Q9UND3 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPA1Q9UND3 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
NPIPA1Q9UND3 AL133338.1-201ENST00000565695 1517 ntBASIC13.97□□□□□ -0.17
NPIPA1Q9UND3 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPA1Q9UND3 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPA1Q9UND3 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.97□□□□□ -0.17
NPIPA1Q9UND3 CNN2P8-201ENST00000421872 913 ntBASIC13.97□□□□□ -0.17
NPIPA1Q9UND3 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC13.97□□□□□ -0.17
NPIPA1Q9UND3 FAM197Y7-201ENST00000432892 766 ntBASIC13.97□□□□□ -0.17
NPIPA1Q9UND3 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPA1Q9UND3 GAPDHP40-201ENST00000505218 1006 ntBASIC13.97□□□□□ -0.17
NPIPA1Q9UND3 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
NPIPA1Q9UND3 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPA1Q9UND3 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
NPIPA1Q9UND3 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.97□□□□□ -0.17
NPIPA1Q9UND3 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.97□□□□□ -0.17
NPIPA1Q9UND3 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.97□□□□□ -0.17
NPIPA1Q9UND3 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPA1Q9UND3 AC091271.1-201ENST00000611877 1162 ntBASIC13.97□□□□□ -0.17
NPIPA1Q9UND3 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.97□□□□□ -0.17
NPIPA1Q9UND3 AC008687.7-202ENST00000637404 953 ntBASIC13.97□□□□□ -0.17
NPIPA1Q9UND3 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.97□□□□□ -0.17
NPIPA1Q9UND3 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPA1Q9UND3 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPA1Q9UND3 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC13.97□□□□□ -0.17
NPIPA1Q9UND3 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPA1Q9UND3 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.97□□□□□ -0.17
NPIPA1Q9UND3 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.97□□□□□ -0.17
NPIPA1Q9UND3 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPA1Q9UND3 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.97□□□□□ -0.17
NPIPA1Q9UND3 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.97□□□□□ -0.17
NPIPA1Q9UND3 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPA1Q9UND3 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.97□□□□□ -0.17
NPIPA1Q9UND3 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPA1Q9UND3 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
NPIPA1Q9UND3 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.97□□□□□ -0.17
NPIPA1Q9UND3 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPA1Q9UND3 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.97□□□□□ -0.17
NPIPA1Q9UND3 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.97□□□□□ -0.17
NPIPA1Q9UND3 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
NPIPA1Q9UND3 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPA1Q9UND3 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.96□□□□□ -0.17
NPIPA1Q9UND3 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
NPIPA1Q9UND3 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
NPIPA1Q9UND3 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPA1Q9UND3 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPA1Q9UND3 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms