Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 AC006001.1-201ENST00000325130 474 ntBASIC17.2■□□□□ 0.34
PCDHA4Q9UN74 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHA4Q9UN74 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDHA4Q9UN74 RPL7P3-201ENST00000441388 714 ntBASIC17.2■□□□□ 0.34
PCDHA4Q9UN74 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDHA4Q9UN74 AC234783.1-201ENST00000441761 496 ntBASIC17.2■□□□□ 0.34
PCDHA4Q9UN74 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHA4Q9UN74 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHA4Q9UN74 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PCDHA4Q9UN74 AC138696.2-201ENST00000607376 223 ntBASIC17.2■□□□□ 0.34
PCDHA4Q9UN74 AC006453.4-201ENST00000636949 1252 ntBASIC17.2■□□□□ 0.34
PCDHA4Q9UN74 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
PCDHA4Q9UN74 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PCDHA4Q9UN74 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHA4Q9UN74 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHA4Q9UN74 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHA4Q9UN74 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHA4Q9UN74 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHA4Q9UN74 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHA4Q9UN74 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDHA4Q9UN74 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDHA4Q9UN74 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHA4Q9UN74 AL390755.1-201ENST00000623716 2027 ntBASIC17.2■□□□□ 0.34
PCDHA4Q9UN74 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHA4Q9UN74 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDHA4Q9UN74 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
PCDHA4Q9UN74 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC17.19■□□□□ 0.34
PCDHA4Q9UN74 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHA4Q9UN74 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHA4Q9UN74 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHA4Q9UN74 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHA4Q9UN74 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC17.19■□□□□ 0.34
PCDHA4Q9UN74 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHA4Q9UN74 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
PCDHA4Q9UN74 GZMB-202ENST00000382540 816 ntTSL 5 BASIC17.19■□□□□ 0.34
PCDHA4Q9UN74 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
PCDHA4Q9UN74 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHA4Q9UN74 MPV17-205ENST00000402310 906 ntTSL 5 BASIC17.19■□□□□ 0.34
PCDHA4Q9UN74 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC17.19■□□□□ 0.34
PCDHA4Q9UN74 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC17.19■□□□□ 0.34
PCDHA4Q9UN74 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PCDHA4Q9UN74 AL391280.1-201ENST00000506969 1062 ntBASIC17.19■□□□□ 0.34
PCDHA4Q9UN74 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC17.19■□□□□ 0.34
PCDHA4Q9UN74 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC17.19■□□□□ 0.34
PCDHA4Q9UN74 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHA4Q9UN74 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDHA4Q9UN74 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHA4Q9UN74 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHA4Q9UN74 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHA4Q9UN74 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
PCDHA4Q9UN74 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHA4Q9UN74 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
PCDHA4Q9UN74 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHA4Q9UN74 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDHA4Q9UN74 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHA4Q9UN74 FKBP4P6-201ENST00000457486 1332 ntBASIC17.19■□□□□ 0.34
PCDHA4Q9UN74 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC17.19■□□□□ 0.34
PCDHA4Q9UN74 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHA4Q9UN74 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
PCDHA4Q9UN74 INE2-201ENST00000630399 1874 ntBASIC17.18■□□□□ 0.34
PCDHA4Q9UN74 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHA4Q9UN74 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHA4Q9UN74 AC011840.2-201ENST00000563063 1520 ntBASIC17.18■□□□□ 0.34
PCDHA4Q9UN74 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
PCDHA4Q9UN74 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
PCDHA4Q9UN74 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHA4Q9UN74 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHA4Q9UN74 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHA4Q9UN74 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHA4Q9UN74 ACA64.2-201ENST00000459014 129 ntBASIC17.18■□□□□ 0.34
PCDHA4Q9UN74 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHA4Q9UN74 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC17.18■□□□□ 0.34
PCDHA4Q9UN74 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
PCDHA4Q9UN74 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC17.18■□□□□ 0.34
PCDHA4Q9UN74 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDHA4Q9UN74 AC106820.3-201ENST00000561653 397 ntBASIC17.18■□□□□ 0.34
PCDHA4Q9UN74 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC17.18■□□□□ 0.34
PCDHA4Q9UN74 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHA4Q9UN74 RHOXF1P1-202ENST00000635473 501 ntBASIC17.18■□□□□ 0.34
PCDHA4Q9UN74 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDHA4Q9UN74 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
PCDHA4Q9UN74 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHA4Q9UN74 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
PCDHA4Q9UN74 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHA4Q9UN74 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHA4Q9UN74 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHA4Q9UN74 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHA4Q9UN74 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
PCDHA4Q9UN74 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
PCDHA4Q9UN74 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHA4Q9UN74 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHA4Q9UN74 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHA4Q9UN74 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
PCDHA4Q9UN74 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHA4Q9UN74 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHA4Q9UN74 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
PCDHA4Q9UN74 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDHA4Q9UN74 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHA4Q9UN74 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHA4Q9UN74 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms