Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.35□□□□□ -0.11
KCMF1Q9P0J7 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
KCMF1Q9P0J7 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
KCMF1Q9P0J7 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
KCMF1Q9P0J7 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.35□□□□□ -0.11
KCMF1Q9P0J7 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KCMF1Q9P0J7 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
KCMF1Q9P0J7 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
KCMF1Q9P0J7 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.34□□□□□ -0.11
KCMF1Q9P0J7 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.34□□□□□ -0.11
KCMF1Q9P0J7 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KCMF1Q9P0J7 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
KCMF1Q9P0J7 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KCMF1Q9P0J7 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.34□□□□□ -0.11
KCMF1Q9P0J7 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KCMF1Q9P0J7 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
KCMF1Q9P0J7 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
KCMF1Q9P0J7 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KCMF1Q9P0J7 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
KCMF1Q9P0J7 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KCMF1Q9P0J7 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
KCMF1Q9P0J7 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KCMF1Q9P0J7 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
KCMF1Q9P0J7 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.34□□□□□ -0.11
KCMF1Q9P0J7 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
KCMF1Q9P0J7 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KCMF1Q9P0J7 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
KCMF1Q9P0J7 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KCMF1Q9P0J7 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.34□□□□□ -0.11
KCMF1Q9P0J7 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
KCMF1Q9P0J7 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.34□□□□□ -0.11
KCMF1Q9P0J7 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
KCMF1Q9P0J7 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
KCMF1Q9P0J7 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.34□□□□□ -0.11
KCMF1Q9P0J7 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
KCMF1Q9P0J7 U91328.1-201ENST00000437528 223 ntBASIC14.34□□□□□ -0.11
KCMF1Q9P0J7 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.34□□□□□ -0.11
KCMF1Q9P0J7 USP32P1-208ENST00000506594 1164 ntBASIC14.34□□□□□ -0.11
KCMF1Q9P0J7 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.34□□□□□ -0.11
KCMF1Q9P0J7 SLC25A47P1-201ENST00000531577 414 ntBASIC14.34□□□□□ -0.11
KCMF1Q9P0J7 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.34□□□□□ -0.11
KCMF1Q9P0J7 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.34□□□□□ -0.11
KCMF1Q9P0J7 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.34□□□□□ -0.11
KCMF1Q9P0J7 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.34□□□□□ -0.11
KCMF1Q9P0J7 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.34□□□□□ -0.11
KCMF1Q9P0J7 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
KCMF1Q9P0J7 AC015936.2-201ENST00000593177 259 ntBASIC14.34□□□□□ -0.11
KCMF1Q9P0J7 AC008735.3-201ENST00000596646 500 ntBASIC14.34□□□□□ -0.11
KCMF1Q9P0J7 AL603764.1-201ENST00000636452 321 ntBASIC14.34□□□□□ -0.11
KCMF1Q9P0J7 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.34□□□□□ -0.11
KCMF1Q9P0J7 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.34□□□□□ -0.11
KCMF1Q9P0J7 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KCMF1Q9P0J7 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.34□□□□□ -0.11
KCMF1Q9P0J7 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
KCMF1Q9P0J7 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KCMF1Q9P0J7 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KCMF1Q9P0J7 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
KCMF1Q9P0J7 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
KCMF1Q9P0J7 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
KCMF1Q9P0J7 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
KCMF1Q9P0J7 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
KCMF1Q9P0J7 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.34□□□□□ -0.11
KCMF1Q9P0J7 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.34□□□□□ -0.11
KCMF1Q9P0J7 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.34□□□□□ -0.11
KCMF1Q9P0J7 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
KCMF1Q9P0J7 AC023908.3-201ENST00000564211 3047 ntBASIC14.33□□□□□ -0.11
KCMF1Q9P0J7 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
KCMF1Q9P0J7 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.33□□□□□ -0.11
KCMF1Q9P0J7 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
KCMF1Q9P0J7 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
KCMF1Q9P0J7 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
KCMF1Q9P0J7 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
KCMF1Q9P0J7 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
KCMF1Q9P0J7 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
KCMF1Q9P0J7 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.33□□□□□ -0.12
KCMF1Q9P0J7 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
KCMF1Q9P0J7 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
KCMF1Q9P0J7 OR8S1-201ENST00000310194 1080 ntBASIC14.33□□□□□ -0.12
KCMF1Q9P0J7 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
KCMF1Q9P0J7 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
KCMF1Q9P0J7 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
KCMF1Q9P0J7 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
KCMF1Q9P0J7 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
KCMF1Q9P0J7 TMEM14DP-201ENST00000422205 345 ntBASIC14.33□□□□□ -0.12
KCMF1Q9P0J7 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.33□□□□□ -0.12
KCMF1Q9P0J7 AC244107.1-201ENST00000442033 332 ntBASIC14.33□□□□□ -0.12
KCMF1Q9P0J7 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.33□□□□□ -0.12
KCMF1Q9P0J7 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.33□□□□□ -0.12
KCMF1Q9P0J7 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
KCMF1Q9P0J7 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.33□□□□□ -0.12
KCMF1Q9P0J7 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC14.33□□□□□ -0.12
KCMF1Q9P0J7 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
KCMF1Q9P0J7 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
KCMF1Q9P0J7 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
KCMF1Q9P0J7 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.33□□□□□ -0.12
KCMF1Q9P0J7 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
KCMF1Q9P0J7 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.33□□□□□ -0.12
KCMF1Q9P0J7 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
KCMF1Q9P0J7 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
KCMF1Q9P0J7 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms