Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
PARPBPQ9NWS1 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PARPBPQ9NWS1 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PARPBPQ9NWS1 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
PARPBPQ9NWS1 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PARPBPQ9NWS1 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PARPBPQ9NWS1 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
PARPBPQ9NWS1 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
PARPBPQ9NWS1 CICP14-201ENST00000629111 2732 ntBASIC13.59□□□□□ -0.23
PARPBPQ9NWS1 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
PARPBPQ9NWS1 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PARPBPQ9NWS1 AC023157.3-201ENST00000619086 2088 ntBASIC13.59□□□□□ -0.23
PARPBPQ9NWS1 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PARPBPQ9NWS1 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PARPBPQ9NWS1 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
PARPBPQ9NWS1 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.59□□□□□ -0.23
PARPBPQ9NWS1 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
PARPBPQ9NWS1 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
PARPBPQ9NWS1 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PARPBPQ9NWS1 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PARPBPQ9NWS1 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PARPBPQ9NWS1 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PARPBPQ9NWS1 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
PARPBPQ9NWS1 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
PARPBPQ9NWS1 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PARPBPQ9NWS1 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PARPBPQ9NWS1 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
PARPBPQ9NWS1 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC13.59□□□□□ -0.23
PARPBPQ9NWS1 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC13.59□□□□□ -0.23
PARPBPQ9NWS1 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC13.59□□□□□ -0.23
PARPBPQ9NWS1 GAPDHP21-201ENST00000450301 1010 ntBASIC13.59□□□□□ -0.23
PARPBPQ9NWS1 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PARPBPQ9NWS1 RN7SL837P-201ENST00000463010 287 ntBASIC13.59□□□□□ -0.23
PARPBPQ9NWS1 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PARPBPQ9NWS1 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.59□□□□□ -0.23
PARPBPQ9NWS1 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.59□□□□□ -0.23
PARPBPQ9NWS1 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC13.59□□□□□ -0.23
PARPBPQ9NWS1 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
PARPBPQ9NWS1 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PARPBPQ9NWS1 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PARPBPQ9NWS1 AC023024.2-201ENST00000623561 1993 ntBASIC13.59□□□□□ -0.23
PARPBPQ9NWS1 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
PARPBPQ9NWS1 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
PARPBPQ9NWS1 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.59□□□□□ -0.23
PARPBPQ9NWS1 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
PARPBPQ9NWS1 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.59□□□□□ -0.23
PARPBPQ9NWS1 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PARPBPQ9NWS1 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
PARPBPQ9NWS1 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PARPBPQ9NWS1 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PARPBPQ9NWS1 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.59□□□□□ -0.23
PARPBPQ9NWS1 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
PARPBPQ9NWS1 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PARPBPQ9NWS1 AC138035.3-201ENST00000622706 2791 ntBASIC13.59□□□□□ -0.23
PARPBPQ9NWS1 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
PARPBPQ9NWS1 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PARPBPQ9NWS1 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
PARPBPQ9NWS1 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
PARPBPQ9NWS1 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.58□□□□□ -0.23
PARPBPQ9NWS1 MROH4P-201ENST00000431302 1578 ntBASIC13.58□□□□□ -0.23
PARPBPQ9NWS1 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
PARPBPQ9NWS1 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.58□□□□□ -0.24
PARPBPQ9NWS1 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PARPBPQ9NWS1 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.58□□□□□ -0.24
PARPBPQ9NWS1 AL158070.2-201ENST00000623713 1621 ntBASIC13.58□□□□□ -0.24
PARPBPQ9NWS1 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.58□□□□□ -0.24
PARPBPQ9NWS1 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PARPBPQ9NWS1 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.58□□□□□ -0.24
PARPBPQ9NWS1 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PARPBPQ9NWS1 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
PARPBPQ9NWS1 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PARPBPQ9NWS1 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.58□□□□□ -0.24
PARPBPQ9NWS1 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC13.58□□□□□ -0.24
PARPBPQ9NWS1 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PARPBPQ9NWS1 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.58□□□□□ -0.24
PARPBPQ9NWS1 BAATP1-201ENST00000412284 1225 ntBASIC13.58□□□□□ -0.24
PARPBPQ9NWS1 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC13.58□□□□□ -0.24
PARPBPQ9NWS1 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
PARPBPQ9NWS1 TTTY23B-201ENST00000442790 549 ntBASIC13.58□□□□□ -0.24
PARPBPQ9NWS1 AC093433.1-201ENST00000458048 571 ntBASIC13.58□□□□□ -0.24
PARPBPQ9NWS1 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.58□□□□□ -0.24
PARPBPQ9NWS1 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC13.58□□□□□ -0.24
PARPBPQ9NWS1 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC13.58□□□□□ -0.24
PARPBPQ9NWS1 CLUHP6-201ENST00000580789 941 ntBASIC13.58□□□□□ -0.24
PARPBPQ9NWS1 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
PARPBPQ9NWS1 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC13.58□□□□□ -0.24
PARPBPQ9NWS1 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.58□□□□□ -0.24
PARPBPQ9NWS1 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.58□□□□□ -0.24
PARPBPQ9NWS1 AC005252.2-201ENST00000624630 1141 ntBASIC13.58□□□□□ -0.24
PARPBPQ9NWS1 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.58□□□□□ -0.24
PARPBPQ9NWS1 AL603764.1-201ENST00000636452 321 ntBASIC13.58□□□□□ -0.24
PARPBPQ9NWS1 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
PARPBPQ9NWS1 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
PARPBPQ9NWS1 AC006058.4-201ENST00000624016 1670 ntBASIC13.58□□□□□ -0.24
PARPBPQ9NWS1 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
PARPBPQ9NWS1 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PARPBPQ9NWS1 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
PARPBPQ9NWS1 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.58□□□□□ -0.24
PARPBPQ9NWS1 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PARPBPQ9NWS1 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms