Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.93□□□□□ -0.18
SDHAF3Q9NRP4 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.93□□□□□ -0.18
SDHAF3Q9NRP4 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
SDHAF3Q9NRP4 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
SDHAF3Q9NRP4 CR383656.2-201ENST00000548656 2254 ntBASIC13.93□□□□□ -0.18
SDHAF3Q9NRP4 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SDHAF3Q9NRP4 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SDHAF3Q9NRP4 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SDHAF3Q9NRP4 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SDHAF3Q9NRP4 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SDHAF3Q9NRP4 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SDHAF3Q9NRP4 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
SDHAF3Q9NRP4 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
SDHAF3Q9NRP4 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SDHAF3Q9NRP4 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SDHAF3Q9NRP4 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SDHAF3Q9NRP4 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
SDHAF3Q9NRP4 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.92□□□□□ -0.18
SDHAF3Q9NRP4 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SDHAF3Q9NRP4 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SDHAF3Q9NRP4 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.92□□□□□ -0.18
SDHAF3Q9NRP4 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SDHAF3Q9NRP4 AP002414.2-201ENST00000591780 3365 ntBASIC13.92□□□□□ -0.18
SDHAF3Q9NRP4 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SDHAF3Q9NRP4 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
SDHAF3Q9NRP4 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.92□□□□□ -0.18
SDHAF3Q9NRP4 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
SDHAF3Q9NRP4 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SDHAF3Q9NRP4 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.92□□□□□ -0.18
SDHAF3Q9NRP4 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.92□□□□□ -0.18
SDHAF3Q9NRP4 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.92□□□□□ -0.18
SDHAF3Q9NRP4 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.92□□□□□ -0.18
SDHAF3Q9NRP4 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SDHAF3Q9NRP4 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SDHAF3Q9NRP4 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.92□□□□□ -0.18
SDHAF3Q9NRP4 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC13.92□□□□□ -0.18
SDHAF3Q9NRP4 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.92□□□□□ -0.18
SDHAF3Q9NRP4 BTNL10-201ENST00000595971 695 ntBASIC13.92□□□□□ -0.18
SDHAF3Q9NRP4 AC233724.13-201ENST00000598383 410 ntBASIC13.92□□□□□ -0.18
SDHAF3Q9NRP4 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.92□□□□□ -0.18
SDHAF3Q9NRP4 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.92□□□□□ -0.18
SDHAF3Q9NRP4 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SDHAF3Q9NRP4 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SDHAF3Q9NRP4 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SDHAF3Q9NRP4 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SDHAF3Q9NRP4 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SDHAF3Q9NRP4 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SDHAF3Q9NRP4 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SDHAF3Q9NRP4 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SDHAF3Q9NRP4 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.92□□□□□ -0.18
SDHAF3Q9NRP4 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SDHAF3Q9NRP4 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SDHAF3Q9NRP4 ZBED1P1-201ENST00000502364 1930 ntBASIC13.92□□□□□ -0.18
SDHAF3Q9NRP4 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SDHAF3Q9NRP4 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.91□□□□□ -0.18
SDHAF3Q9NRP4 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SDHAF3Q9NRP4 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.91□□□□□ -0.18
SDHAF3Q9NRP4 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.91□□□□□ -0.18
SDHAF3Q9NRP4 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.91□□□□□ -0.18
SDHAF3Q9NRP4 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SDHAF3Q9NRP4 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SDHAF3Q9NRP4 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SDHAF3Q9NRP4 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SDHAF3Q9NRP4 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.91□□□□□ -0.18
SDHAF3Q9NRP4 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SDHAF3Q9NRP4 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SDHAF3Q9NRP4 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.91□□□□□ -0.18
SDHAF3Q9NRP4 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.91□□□□□ -0.18
SDHAF3Q9NRP4 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.91□□□□□ -0.18
SDHAF3Q9NRP4 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SDHAF3Q9NRP4 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SDHAF3Q9NRP4 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.91□□□□□ -0.18
SDHAF3Q9NRP4 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.91□□□□□ -0.18
SDHAF3Q9NRP4 C2orf27AP3-201ENST00000434123 579 ntBASIC13.91□□□□□ -0.18
SDHAF3Q9NRP4 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
SDHAF3Q9NRP4 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.91□□□□□ -0.18
SDHAF3Q9NRP4 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SDHAF3Q9NRP4 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SDHAF3Q9NRP4 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.91□□□□□ -0.18
SDHAF3Q9NRP4 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.91□□□□□ -0.18
SDHAF3Q9NRP4 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.91□□□□□ -0.18
SDHAF3Q9NRP4 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC13.91□□□□□ -0.18
SDHAF3Q9NRP4 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.91□□□□□ -0.18
SDHAF3Q9NRP4 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.91□□□□□ -0.18
SDHAF3Q9NRP4 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
SDHAF3Q9NRP4 AL354718.3-201ENST00000616414 581 ntBASIC13.91□□□□□ -0.18
SDHAF3Q9NRP4 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.91□□□□□ -0.18
SDHAF3Q9NRP4 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.91□□□□□ -0.18
SDHAF3Q9NRP4 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
SDHAF3Q9NRP4 IGHV3-72-202ENST00000621503 303 ntBASIC13.91□□□□□ -0.18
SDHAF3Q9NRP4 CR382287.1-201ENST00000623954 586 ntBASIC13.91□□□□□ -0.18
SDHAF3Q9NRP4 AL035252.4-201ENST00000624174 288 ntBASIC13.91□□□□□ -0.18
SDHAF3Q9NRP4 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
SDHAF3Q9NRP4 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.91□□□□□ -0.18
SDHAF3Q9NRP4 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.91□□□□□ -0.18
SDHAF3Q9NRP4 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SDHAF3Q9NRP4 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
SDHAF3Q9NRP4 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
SDHAF3Q9NRP4 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SDHAF3Q9NRP4 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms