Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.07■□□□□ 0.48
RTN4Q9NQC3 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.07■□□□□ 0.48
RTN4Q9NQC3 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.07■□□□□ 0.48
RTN4Q9NQC3 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RTN4Q9NQC3 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
RTN4Q9NQC3 AL445228.2-201ENST00000605589 952 ntBASIC18.07■□□□□ 0.48
RTN4Q9NQC3 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RTN4Q9NQC3 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
RTN4Q9NQC3 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
RTN4Q9NQC3 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
RTN4Q9NQC3 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC18.07■□□□□ 0.48
RTN4Q9NQC3 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RTN4Q9NQC3 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RTN4Q9NQC3 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC18.07■□□□□ 0.48
RTN4Q9NQC3 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RTN4Q9NQC3 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RTN4Q9NQC3 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RTN4Q9NQC3 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.07■□□□□ 0.48
RTN4Q9NQC3 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RTN4Q9NQC3 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RTN4Q9NQC3 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RTN4Q9NQC3 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RTN4Q9NQC3 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RTN4Q9NQC3 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC18.06■□□□□ 0.48
RTN4Q9NQC3 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.06■□□□□ 0.48
RTN4Q9NQC3 AC005622.1-201ENST00000636801 1703 ntBASIC18.06■□□□□ 0.48
RTN4Q9NQC3 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RTN4Q9NQC3 USO1-201ENST00000264904 4135 ntTSL 2 BASIC18.06■□□□□ 0.48
RTN4Q9NQC3 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RTN4Q9NQC3 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RTN4Q9NQC3 ELN-204ENST00000357036 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RTN4Q9NQC3 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RTN4Q9NQC3 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RTN4Q9NQC3 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC18.06■□□□□ 0.48
RTN4Q9NQC3 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RTN4Q9NQC3 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RTN4Q9NQC3 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.06■□□□□ 0.48
RTN4Q9NQC3 OLA1-206ENST00000428402 1270 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RTN4Q9NQC3 AL359839.1-201ENST00000451975 1160 ntBASIC18.06■□□□□ 0.48
RTN4Q9NQC3 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.06■□□□□ 0.48
RTN4Q9NQC3 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC18.06■□□□□ 0.48
RTN4Q9NQC3 AF238378.1-201ENST00000526806 358 ntBASIC18.06■□□□□ 0.48
RTN4Q9NQC3 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.06■□□□□ 0.48
RTN4Q9NQC3 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.06■□□□□ 0.48
RTN4Q9NQC3 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.06■□□□□ 0.48
RTN4Q9NQC3 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.06■□□□□ 0.48
RTN4Q9NQC3 AC091304.2-201ENST00000564639 760 ntBASIC18.06■□□□□ 0.48
RTN4Q9NQC3 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.06■□□□□ 0.48
RTN4Q9NQC3 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.06■□□□□ 0.48
RTN4Q9NQC3 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RTN4Q9NQC3 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.06■□□□□ 0.48
RTN4Q9NQC3 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.06■□□□□ 0.48
RTN4Q9NQC3 AC025268.1-201ENST00000632192 1199 ntBASIC18.06■□□□□ 0.48
RTN4Q9NQC3 PGM5P2-202ENST00000637225 1043 ntBASIC18.06■□□□□ 0.48
RTN4Q9NQC3 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.06■□□□□ 0.48
RTN4Q9NQC3 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
RTN4Q9NQC3 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RTN4Q9NQC3 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RTN4Q9NQC3 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RTN4Q9NQC3 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RTN4Q9NQC3 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
RTN4Q9NQC3 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RTN4Q9NQC3 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC18.06■□□□□ 0.48
RTN4Q9NQC3 EXD2-204ENST00000409242 2496 ntTSL 2 BASIC18.06■□□□□ 0.48
RTN4Q9NQC3 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
RTN4Q9NQC3 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RTN4Q9NQC3 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
RTN4Q9NQC3 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RTN4Q9NQC3 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RTN4Q9NQC3 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTN4Q9NQC3 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTN4Q9NQC3 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC18.05■□□□□ 0.48
RTN4Q9NQC3 SLC38A7-215ENST00000570101 4549 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTN4Q9NQC3 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
RTN4Q9NQC3 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC18.05■□□□□ 0.48
RTN4Q9NQC3 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTN4Q9NQC3 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
RTN4Q9NQC3 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.05■□□□□ 0.48
RTN4Q9NQC3 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC18.05■□□□□ 0.48
RTN4Q9NQC3 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTN4Q9NQC3 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RTN4Q9NQC3 ARMC10P1-201ENST00000313754 855 ntBASIC18.05■□□□□ 0.48
RTN4Q9NQC3 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RTN4Q9NQC3 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.05■□□□□ 0.48
RTN4Q9NQC3 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
RTN4Q9NQC3 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.05■□□□□ 0.48
RTN4Q9NQC3 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.05■□□□□ 0.48
RTN4Q9NQC3 AL157871.5-201ENST00000555212 533 ntTSL 2 BASIC18.05■□□□□ 0.48
RTN4Q9NQC3 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.05■□□□□ 0.48
RTN4Q9NQC3 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.05■□□□□ 0.48
RTN4Q9NQC3 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.05■□□□□ 0.48
RTN4Q9NQC3 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTN4Q9NQC3 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTN4Q9NQC3 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
RTN4Q9NQC3 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC18.05■□□□□ 0.48
RTN4Q9NQC3 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC18.05■□□□□ 0.48
RTN4Q9NQC3 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
RTN4Q9NQC3 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RTN4Q9NQC3 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTN4Q9NQC3 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms