Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.2■□□□□ 0.18
NXF3Q9H4D5 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NXF3Q9H4D5 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NXF3Q9H4D5 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
NXF3Q9H4D5 CALR4P-201ENST00000431943 946 ntBASIC16.2■□□□□ 0.18
NXF3Q9H4D5 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC16.2■□□□□ 0.18
NXF3Q9H4D5 AKR7A2P1-201ENST00000460134 915 ntBASIC16.2■□□□□ 0.18
NXF3Q9H4D5 SERPINA13P-202ENST00000478994 924 ntBASIC16.2■□□□□ 0.18
NXF3Q9H4D5 HIST2H2BC-201ENST00000498492 580 ntBASIC16.2■□□□□ 0.18
NXF3Q9H4D5 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC16.2■□□□□ 0.18
NXF3Q9H4D5 IGHV3OR16-16-201ENST00000563644 343 ntBASIC16.2■□□□□ 0.18
NXF3Q9H4D5 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NXF3Q9H4D5 NAT9-222ENST00000583476 583 ntTSL 3 BASIC16.2■□□□□ 0.18
NXF3Q9H4D5 AC020914.3-201ENST00000594712 304 ntBASIC16.2■□□□□ 0.18
NXF3Q9H4D5 AC009955.4-201ENST00000597192 544 ntBASIC16.2■□□□□ 0.18
NXF3Q9H4D5 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC16.2■□□□□ 0.18
NXF3Q9H4D5 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NXF3Q9H4D5 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NXF3Q9H4D5 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC16.2■□□□□ 0.18
NXF3Q9H4D5 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NXF3Q9H4D5 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
NXF3Q9H4D5 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
NXF3Q9H4D5 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.2■□□□□ 0.18
NXF3Q9H4D5 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NXF3Q9H4D5 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
NXF3Q9H4D5 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NXF3Q9H4D5 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NXF3Q9H4D5 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NXF3Q9H4D5 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NXF3Q9H4D5 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC16.2■□□□□ 0.18
NXF3Q9H4D5 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NXF3Q9H4D5 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.2■□□□□ 0.18
NXF3Q9H4D5 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NXF3Q9H4D5 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
NXF3Q9H4D5 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
NXF3Q9H4D5 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
NXF3Q9H4D5 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.2■□□□□ 0.18
NXF3Q9H4D5 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NXF3Q9H4D5 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
NXF3Q9H4D5 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NXF3Q9H4D5 AC022532.1-201ENST00000624563 1728 ntBASIC16.19■□□□□ 0.18
NXF3Q9H4D5 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
NXF3Q9H4D5 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.19■□□□□ 0.18
NXF3Q9H4D5 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NXF3Q9H4D5 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NXF3Q9H4D5 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.19■□□□□ 0.18
NXF3Q9H4D5 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
NXF3Q9H4D5 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
NXF3Q9H4D5 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
NXF3Q9H4D5 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NXF3Q9H4D5 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NXF3Q9H4D5 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
NXF3Q9H4D5 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NXF3Q9H4D5 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NXF3Q9H4D5 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
NXF3Q9H4D5 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NXF3Q9H4D5 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NXF3Q9H4D5 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC16.19■□□□□ 0.18
NXF3Q9H4D5 AC138028.6-201ENST00000616106 1482 ntBASIC16.19■□□□□ 0.18
NXF3Q9H4D5 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC16.19■□□□□ 0.18
NXF3Q9H4D5 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NXF3Q9H4D5 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
NXF3Q9H4D5 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NXF3Q9H4D5 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NXF3Q9H4D5 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NXF3Q9H4D5 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NXF3Q9H4D5 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC16.19■□□□□ 0.18
NXF3Q9H4D5 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC16.19■□□□□ 0.18
NXF3Q9H4D5 AC010141.1-201ENST00000411585 623 ntBASIC16.19■□□□□ 0.18
NXF3Q9H4D5 TLE1P1-201ENST00000422965 589 ntBASIC16.19■□□□□ 0.18
NXF3Q9H4D5 FNTAP2-201ENST00000430308 634 ntBASIC16.19■□□□□ 0.18
NXF3Q9H4D5 BX284668.4-201ENST00000453917 508 ntBASIC16.19■□□□□ 0.18
NXF3Q9H4D5 RNMTL1P1-201ENST00000454103 560 ntBASIC16.19■□□□□ 0.18
NXF3Q9H4D5 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC16.19■□□□□ 0.18
NXF3Q9H4D5 AC021723.1-201ENST00000486306 515 ntBASIC16.19■□□□□ 0.18
NXF3Q9H4D5 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
NXF3Q9H4D5 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC16.19■□□□□ 0.18
NXF3Q9H4D5 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC16.19■□□□□ 0.18
NXF3Q9H4D5 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC16.19■□□□□ 0.18
NXF3Q9H4D5 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC16.19■□□□□ 0.18
NXF3Q9H4D5 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NXF3Q9H4D5 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NXF3Q9H4D5 AC022748.3-201ENST00000621828 275 ntBASIC16.19■□□□□ 0.18
NXF3Q9H4D5 AL162426.1-201ENST00000624141 743 ntBASIC16.19■□□□□ 0.18
NXF3Q9H4D5 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
NXF3Q9H4D5 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NXF3Q9H4D5 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
NXF3Q9H4D5 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NXF3Q9H4D5 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NXF3Q9H4D5 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
NXF3Q9H4D5 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NXF3Q9H4D5 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NXF3Q9H4D5 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NXF3Q9H4D5 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.19■□□□□ 0.18
NXF3Q9H4D5 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NXF3Q9H4D5 AC006486.2-201ENST00000624246 2199 ntBASIC16.19■□□□□ 0.18
NXF3Q9H4D5 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NXF3Q9H4D5 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NXF3Q9H4D5 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
NXF3Q9H4D5 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms