Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC16.39■□□□□ 0.21
HIPK3Q9H422 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC16.39■□□□□ 0.21
HIPK3Q9H422 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.39■□□□□ 0.21
HIPK3Q9H422 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
HIPK3Q9H422 Z98259.2-201ENST00000641583 609 ntBASIC16.39■□□□□ 0.21
HIPK3Q9H422 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HIPK3Q9H422 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HIPK3Q9H422 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.39■□□□□ 0.21
HIPK3Q9H422 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
HIPK3Q9H422 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
HIPK3Q9H422 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HIPK3Q9H422 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HIPK3Q9H422 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HIPK3Q9H422 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC16.39■□□□□ 0.21
HIPK3Q9H422 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HIPK3Q9H422 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
HIPK3Q9H422 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.39■□□□□ 0.21
HIPK3Q9H422 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.39■□□□□ 0.21
HIPK3Q9H422 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.39■□□□□ 0.21
HIPK3Q9H422 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
HIPK3Q9H422 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HIPK3Q9H422 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.39■□□□□ 0.21
HIPK3Q9H422 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HIPK3Q9H422 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
HIPK3Q9H422 AC007950.2-201ENST00000615045 2347 ntBASIC16.39■□□□□ 0.21
HIPK3Q9H422 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.38■□□□□ 0.21
HIPK3Q9H422 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.38■□□□□ 0.21
HIPK3Q9H422 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIPK3Q9H422 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIPK3Q9H422 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.38■□□□□ 0.21
HIPK3Q9H422 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HIPK3Q9H422 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
HIPK3Q9H422 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
HIPK3Q9H422 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIPK3Q9H422 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIPK3Q9H422 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.38■□□□□ 0.21
HIPK3Q9H422 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIPK3Q9H422 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC16.38■□□□□ 0.21
HIPK3Q9H422 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.38■□□□□ 0.21
HIPK3Q9H422 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIPK3Q9H422 AP000356.3-201ENST00000382243 753 ntBASIC16.38■□□□□ 0.21
HIPK3Q9H422 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
HIPK3Q9H422 HPGD-203ENST00000422112 805 ntTSL 2 BASIC16.38■□□□□ 0.21
HIPK3Q9H422 RPL8P2-201ENST00000430538 502 ntBASIC16.38■□□□□ 0.21
HIPK3Q9H422 RPL7P35-201ENST00000446943 740 ntBASIC16.38■□□□□ 0.21
HIPK3Q9H422 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HIPK3Q9H422 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC16.38■□□□□ 0.21
HIPK3Q9H422 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC16.38■□□□□ 0.21
HIPK3Q9H422 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC16.38■□□□□ 0.21
HIPK3Q9H422 YRDCP1-201ENST00000621419 643 ntBASIC16.38■□□□□ 0.21
HIPK3Q9H422 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.38■□□□□ 0.21
HIPK3Q9H422 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.38■□□□□ 0.21
HIPK3Q9H422 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIPK3Q9H422 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIPK3Q9H422 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.38■□□□□ 0.21
HIPK3Q9H422 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
HIPK3Q9H422 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
HIPK3Q9H422 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
HIPK3Q9H422 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIPK3Q9H422 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
HIPK3Q9H422 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIPK3Q9H422 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIPK3Q9H422 CAP2P1-201ENST00000557743 1390 ntBASIC16.38■□□□□ 0.21
HIPK3Q9H422 AC006449.5-201ENST00000610658 2098 ntBASIC16.38■□□□□ 0.21
HIPK3Q9H422 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HIPK3Q9H422 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIPK3Q9H422 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.37■□□□□ 0.21
HIPK3Q9H422 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIPK3Q9H422 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
HIPK3Q9H422 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIPK3Q9H422 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIPK3Q9H422 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
HIPK3Q9H422 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.37■□□□□ 0.21
HIPK3Q9H422 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
HIPK3Q9H422 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIPK3Q9H422 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HIPK3Q9H422 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HIPK3Q9H422 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIPK3Q9H422 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIPK3Q9H422 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.37■□□□□ 0.21
HIPK3Q9H422 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIPK3Q9H422 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HIPK3Q9H422 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HIPK3Q9H422 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
HIPK3Q9H422 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIPK3Q9H422 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIPK3Q9H422 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIPK3Q9H422 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
HIPK3Q9H422 PFN2-202ENST00000423691 911 ntTSL 2 BASIC16.37■□□□□ 0.21
HIPK3Q9H422 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HIPK3Q9H422 AC079112.1-201ENST00000454972 939 ntBASIC16.37■□□□□ 0.21
HIPK3Q9H422 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC16.37■□□□□ 0.21
HIPK3Q9H422 AC008723.1-201ENST00000506922 207 ntBASIC16.37■□□□□ 0.21
HIPK3Q9H422 AP002803.1-201ENST00000528836 498 ntBASIC16.37■□□□□ 0.21
HIPK3Q9H422 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
HIPK3Q9H422 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
HIPK3Q9H422 AL031713.1-201ENST00000564813 661 ntBASIC16.37■□□□□ 0.21
HIPK3Q9H422 AC026803.1-201ENST00000569130 274 ntBASIC16.37■□□□□ 0.21
HIPK3Q9H422 AL109837.1-201ENST00000603272 613 ntBASIC16.37■□□□□ 0.21
HIPK3Q9H422 MIR6720-201ENST00000611664 98 ntBASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms