Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.96■□□□□ 0.15
PAAF1Q9BRP4 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.96■□□□□ 0.15
PAAF1Q9BRP4 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC15.96■□□□□ 0.15
PAAF1Q9BRP4 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PAAF1Q9BRP4 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PAAF1Q9BRP4 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PAAF1Q9BRP4 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PAAF1Q9BRP4 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PAAF1Q9BRP4 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PAAF1Q9BRP4 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC15.96■□□□□ 0.15
PAAF1Q9BRP4 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PAAF1Q9BRP4 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC15.96■□□□□ 0.15
PAAF1Q9BRP4 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
PAAF1Q9BRP4 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
PAAF1Q9BRP4 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PAAF1Q9BRP4 ACTG1P2-201ENST00000415776 1125 ntBASIC15.96■□□□□ 0.15
PAAF1Q9BRP4 ACTG1P11-201ENST00000425411 1125 ntBASIC15.96■□□□□ 0.15
PAAF1Q9BRP4 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC15.96■□□□□ 0.15
PAAF1Q9BRP4 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC15.96■□□□□ 0.15
PAAF1Q9BRP4 TUBB8P8-201ENST00000458717 1058 ntBASIC15.96■□□□□ 0.15
PAAF1Q9BRP4 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC15.96■□□□□ 0.15
PAAF1Q9BRP4 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
PAAF1Q9BRP4 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PAAF1Q9BRP4 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.96■□□□□ 0.15
PAAF1Q9BRP4 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PAAF1Q9BRP4 CSH2-206ENST00000560142 749 ntTSL 5 BASIC15.96■□□□□ 0.15
PAAF1Q9BRP4 RN7SL774P-201ENST00000577467 290 ntBASIC15.96■□□□□ 0.15
PAAF1Q9BRP4 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC15.96■□□□□ 0.15
PAAF1Q9BRP4 KLK3-207ENST00000595952 969 ntTSL 3 BASIC15.96■□□□□ 0.15
PAAF1Q9BRP4 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC15.96■□□□□ 0.15
PAAF1Q9BRP4 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
PAAF1Q9BRP4 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
PAAF1Q9BRP4 AC138627.1-207ENST00000641560 1006 ntBASIC15.96■□□□□ 0.15
PAAF1Q9BRP4 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
PAAF1Q9BRP4 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.96■□□□□ 0.15
PAAF1Q9BRP4 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
PAAF1Q9BRP4 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PAAF1Q9BRP4 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
PAAF1Q9BRP4 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.14
PAAF1Q9BRP4 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
PAAF1Q9BRP4 AC007292.2-201ENST00000593524 1812 ntBASIC15.96■□□□□ 0.14
PAAF1Q9BRP4 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
PAAF1Q9BRP4 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
PAAF1Q9BRP4 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
PAAF1Q9BRP4 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
PAAF1Q9BRP4 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PAAF1Q9BRP4 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.95■□□□□ 0.14
PAAF1Q9BRP4 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PAAF1Q9BRP4 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.95■□□□□ 0.14
PAAF1Q9BRP4 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.95■□□□□ 0.14
PAAF1Q9BRP4 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PAAF1Q9BRP4 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PAAF1Q9BRP4 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
PAAF1Q9BRP4 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
PAAF1Q9BRP4 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PAAF1Q9BRP4 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
PAAF1Q9BRP4 TLE1P1-201ENST00000422965 589 ntBASIC15.95■□□□□ 0.14
PAAF1Q9BRP4 RNA5SP423-201ENST00000517127 109 ntBASIC15.95■□□□□ 0.14
PAAF1Q9BRP4 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC15.95■□□□□ 0.14
PAAF1Q9BRP4 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.95■□□□□ 0.14
PAAF1Q9BRP4 AC105129.2-201ENST00000559536 390 ntBASIC15.95■□□□□ 0.14
PAAF1Q9BRP4 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.95■□□□□ 0.14
PAAF1Q9BRP4 MIR3619-201ENST00000579667 83 ntBASIC15.95■□□□□ 0.14
PAAF1Q9BRP4 RN7SL163P-201ENST00000583100 276 ntBASIC15.95■□□□□ 0.14
PAAF1Q9BRP4 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PAAF1Q9BRP4 AC026740.1-201ENST00000607068 791 ntBASIC15.95■□□□□ 0.14
PAAF1Q9BRP4 AC097724.1-201ENST00000609581 426 ntBASIC15.95■□□□□ 0.14
PAAF1Q9BRP4 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC15.95■□□□□ 0.14
PAAF1Q9BRP4 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
PAAF1Q9BRP4 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PAAF1Q9BRP4 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PAAF1Q9BRP4 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PAAF1Q9BRP4 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.95■□□□□ 0.14
PAAF1Q9BRP4 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
PAAF1Q9BRP4 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
PAAF1Q9BRP4 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PAAF1Q9BRP4 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.95■□□□□ 0.14
PAAF1Q9BRP4 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PAAF1Q9BRP4 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.95■□□□□ 0.14
PAAF1Q9BRP4 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PAAF1Q9BRP4 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
PAAF1Q9BRP4 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PAAF1Q9BRP4 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PAAF1Q9BRP4 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
PAAF1Q9BRP4 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.94■□□□□ 0.14
PAAF1Q9BRP4 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PAAF1Q9BRP4 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PAAF1Q9BRP4 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PAAF1Q9BRP4 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
PAAF1Q9BRP4 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.94■□□□□ 0.14
PAAF1Q9BRP4 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PAAF1Q9BRP4 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
PAAF1Q9BRP4 MBLAC2-202ENST00000514906 1936 ntBASIC15.94■□□□□ 0.14
PAAF1Q9BRP4 AMT-239ENST00000636865 1914 ntTSL 5 BASIC15.94■□□□□ 0.14
PAAF1Q9BRP4 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
PAAF1Q9BRP4 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
PAAF1Q9BRP4 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.94■□□□□ 0.14
PAAF1Q9BRP4 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PAAF1Q9BRP4 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PAAF1Q9BRP4 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms