Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMOQ99835 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.75■□□□□ 0.11
SMOQ99835 AC015818.8-201ENST00000587907 1519 ntBASIC15.75■□□□□ 0.11
SMOQ99835 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMOQ99835 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMOQ99835 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMOQ99835 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC15.75■□□□□ 0.11
SMOQ99835 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SMOQ99835 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
SMOQ99835 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMOQ99835 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC15.75■□□□□ 0.11
SMOQ99835 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SMOQ99835 AC100850.1-201ENST00000506768 649 ntBASIC15.75■□□□□ 0.11
SMOQ99835 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
SMOQ99835 NCK2-206ENST00000522586 490 ntTSL 5 BASIC15.75■□□□□ 0.11
SMOQ99835 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.75■□□□□ 0.11
SMOQ99835 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SMOQ99835 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC15.75■□□□□ 0.11
SMOQ99835 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.75■□□□□ 0.11
SMOQ99835 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
SMOQ99835 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC15.75■□□□□ 0.11
SMOQ99835 MIR4538-201ENST00000581377 78 ntBASIC15.75■□□□□ 0.11
SMOQ99835 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.75■□□□□ 0.11
SMOQ99835 AC006058.4-201ENST00000624016 1670 ntBASIC15.75■□□□□ 0.11
SMOQ99835 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC15.75■□□□□ 0.11
SMOQ99835 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
SMOQ99835 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMOQ99835 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMOQ99835 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SMOQ99835 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.75■□□□□ 0.11
SMOQ99835 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
SMOQ99835 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMOQ99835 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMOQ99835 AP002414.2-201ENST00000591780 3365 ntBASIC15.75■□□□□ 0.11
SMOQ99835 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMOQ99835 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMOQ99835 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.75■□□□□ 0.11
SMOQ99835 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.75■□□□□ 0.11
SMOQ99835 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMOQ99835 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMOQ99835 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMOQ99835 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMOQ99835 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.74■□□□□ 0.11
SMOQ99835 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMOQ99835 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SMOQ99835 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SMOQ99835 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMOQ99835 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.74■□□□□ 0.11
SMOQ99835 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMOQ99835 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMOQ99835 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMOQ99835 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMOQ99835 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMOQ99835 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SMOQ99835 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
SMOQ99835 BRWD1P1-201ENST00000401091 371 ntBASIC15.74■□□□□ 0.11
SMOQ99835 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC15.74■□□□□ 0.11
SMOQ99835 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC15.74■□□□□ 0.11
SMOQ99835 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMOQ99835 AC108725.1-201ENST00000495472 409 ntBASIC15.74■□□□□ 0.11
SMOQ99835 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC15.74■□□□□ 0.11
SMOQ99835 AC131206.1-201ENST00000538078 1211 ntBASIC15.74■□□□□ 0.11
SMOQ99835 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.74■□□□□ 0.11
SMOQ99835 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC15.74■□□□□ 0.11
SMOQ99835 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.74■□□□□ 0.11
SMOQ99835 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC15.74■□□□□ 0.11
SMOQ99835 MIR6799-201ENST00000620297 69 ntBASIC15.74■□□□□ 0.11
SMOQ99835 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC15.74■□□□□ 0.11
SMOQ99835 AP001002.3-201ENST00000623482 206 ntBASIC15.74■□□□□ 0.11
SMOQ99835 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC15.74■□□□□ 0.11
SMOQ99835 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMOQ99835 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
SMOQ99835 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMOQ99835 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMOQ99835 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.74■□□□□ 0.11
SMOQ99835 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SMOQ99835 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.74■□□□□ 0.11
SMOQ99835 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SMOQ99835 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SMOQ99835 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.74■□□□□ 0.11
SMOQ99835 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SMOQ99835 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.74■□□□□ 0.11
SMOQ99835 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
SMOQ99835 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SMOQ99835 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SMOQ99835 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SMOQ99835 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SMOQ99835 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
SMOQ99835 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC15.73■□□□□ 0.11
SMOQ99835 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SMOQ99835 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SMOQ99835 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.73■□□□□ 0.11
SMOQ99835 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.73■□□□□ 0.11
SMOQ99835 AC018442.1-201ENST00000421439 2061 ntBASIC15.73■□□□□ 0.11
SMOQ99835 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
SMOQ99835 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SMOQ99835 AC079178.1-201ENST00000420915 656 ntBASIC15.73■□□□□ 0.11
SMOQ99835 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SMOQ99835 MTX1P1-201ENST00000440904 838 ntBASIC15.73■□□□□ 0.11
SMOQ99835 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms