Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC10.05□□□□□ -0.8
LITAFQ99732 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
LITAFQ99732 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LITAFQ99732 API5-203ENST00000455725 2257 ntTSL 2 BASIC10.05□□□□□ -0.8
LITAFQ99732 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
LITAFQ99732 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
LITAFQ99732 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
LITAFQ99732 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC10.05□□□□□ -0.8
LITAFQ99732 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LITAFQ99732 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
LITAFQ99732 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
LITAFQ99732 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LITAFQ99732 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC10.05□□□□□ -0.8
LITAFQ99732 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LITAFQ99732 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
LITAFQ99732 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC10.05□□□□□ -0.8
LITAFQ99732 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
LITAFQ99732 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
LITAFQ99732 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LITAFQ99732 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
LITAFQ99732 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
LITAFQ99732 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC10.04□□□□□ -0.8
LITAFQ99732 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LITAFQ99732 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
LITAFQ99732 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
LITAFQ99732 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
LITAFQ99732 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
LITAFQ99732 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
LITAFQ99732 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LITAFQ99732 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC10.04□□□□□ -0.8
LITAFQ99732 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LITAFQ99732 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
LITAFQ99732 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC10.04□□□□□ -0.8
LITAFQ99732 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
LITAFQ99732 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
LITAFQ99732 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC10.04□□□□□ -0.8
LITAFQ99732 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
LITAFQ99732 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LITAFQ99732 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LITAFQ99732 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
LITAFQ99732 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC10.04□□□□□ -0.8
LITAFQ99732 AP000437.1-201ENST00000624057 2085 ntBASIC10.04□□□□□ -0.8
LITAFQ99732 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LITAFQ99732 DFFB-203ENST00000341385 572 ntTSL 5 BASIC10.04□□□□□ -0.8
LITAFQ99732 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
LITAFQ99732 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
LITAFQ99732 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC10.04□□□□□ -0.8
LITAFQ99732 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC10.04□□□□□ -0.8
LITAFQ99732 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
LITAFQ99732 SLC4A1APP2-201ENST00000424054 1259 ntBASIC10.04□□□□□ -0.8
LITAFQ99732 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC10.04□□□□□ -0.8
LITAFQ99732 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC10.04□□□□□ -0.8
LITAFQ99732 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC10.04□□□□□ -0.8
LITAFQ99732 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC10.04□□□□□ -0.8
LITAFQ99732 HIST3H2BA-201ENST00000436555 524 ntBASIC10.04□□□□□ -0.8
LITAFQ99732 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC10.04□□□□□ -0.8
LITAFQ99732 HCG4B-203ENST00000450128 991 ntBASIC10.04□□□□□ -0.8
LITAFQ99732 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC10.04□□□□□ -0.8
LITAFQ99732 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC10.04□□□□□ -0.8
LITAFQ99732 AC073648.2-201ENST00000510116 352 ntBASIC10.04□□□□□ -0.8
LITAFQ99732 AF238378.1-201ENST00000526806 358 ntBASIC10.04□□□□□ -0.8
LITAFQ99732 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC10.04□□□□□ -0.8
LITAFQ99732 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC10.04□□□□□ -0.8
LITAFQ99732 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
LITAFQ99732 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC10.04□□□□□ -0.8
LITAFQ99732 MED16-214ENST00000617672 554 ntTSL 5 BASIC10.04□□□□□ -0.8
LITAFQ99732 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LITAFQ99732 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
LITAFQ99732 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC10.04□□□□□ -0.8
LITAFQ99732 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LITAFQ99732 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LITAFQ99732 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC10.04□□□□□ -0.8
LITAFQ99732 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LITAFQ99732 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LITAFQ99732 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LITAFQ99732 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC10.04□□□□□ -0.8
LITAFQ99732 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LITAFQ99732 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
LITAFQ99732 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC10.04□□□□□ -0.8
LITAFQ99732 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
LITAFQ99732 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LITAFQ99732 PES1-204ENST00000402284 2144 ntTSL 5 BASIC10.04□□□□□ -0.8
LITAFQ99732 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC10.04□□□□□ -0.8
LITAFQ99732 AC135782.3-201ENST00000562782 2105 ntBASIC10.04□□□□□ -0.8
LITAFQ99732 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LITAFQ99732 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LITAFQ99732 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC10.04□□□□□ -0.8
LITAFQ99732 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
LITAFQ99732 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC10.04□□□□□ -0.8
LITAFQ99732 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
LITAFQ99732 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
LITAFQ99732 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LITAFQ99732 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
LITAFQ99732 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC10.04□□□□□ -0.8
LITAFQ99732 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LITAFQ99732 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LITAFQ99732 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LITAFQ99732 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LITAFQ99732 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
LITAFQ99732 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms