Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC17.67■□□□□ 0.42
TRIM47Q96LD4 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM47Q96LD4 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM47Q96LD4 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC17.67■□□□□ 0.42
TRIM47Q96LD4 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
TRIM47Q96LD4 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC17.67■□□□□ 0.42
TRIM47Q96LD4 AC079336.7-201ENST00000623428 1078 ntBASIC17.67■□□□□ 0.42
TRIM47Q96LD4 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM47Q96LD4 PGR-210ENST00000619228 3038 ntTSL 5 BASIC17.67■□□□□ 0.42
TRIM47Q96LD4 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC17.67■□□□□ 0.42
TRIM47Q96LD4 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM47Q96LD4 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
TRIM47Q96LD4 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
TRIM47Q96LD4 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC17.67■□□□□ 0.42
TRIM47Q96LD4 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM47Q96LD4 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TRIM47Q96LD4 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM47Q96LD4 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM47Q96LD4 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC17.67■□□□□ 0.42
TRIM47Q96LD4 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM47Q96LD4 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM47Q96LD4 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TRIM47Q96LD4 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC17.66■□□□□ 0.42
TRIM47Q96LD4 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TRIM47Q96LD4 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM47Q96LD4 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM47Q96LD4 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM47Q96LD4 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
TRIM47Q96LD4 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TRIM47Q96LD4 AL008707.1-201ENST00000422498 534 ntBASIC17.66■□□□□ 0.42
TRIM47Q96LD4 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC17.66■□□□□ 0.42
TRIM47Q96LD4 AC114812.1-204ENST00000449669 728 ntBASIC17.66■□□□□ 0.42
TRIM47Q96LD4 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM47Q96LD4 ATP6V0CP2-201ENST00000469409 207 ntBASIC17.66■□□□□ 0.42
TRIM47Q96LD4 RN7SL11P-201ENST00000471305 293 ntBASIC17.66■□□□□ 0.42
TRIM47Q96LD4 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC17.66■□□□□ 0.42
TRIM47Q96LD4 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM47Q96LD4 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC17.66■□□□□ 0.42
TRIM47Q96LD4 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
TRIM47Q96LD4 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC17.66■□□□□ 0.42
TRIM47Q96LD4 RN7SL774P-201ENST00000577467 290 ntBASIC17.66■□□□□ 0.42
TRIM47Q96LD4 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC17.66■□□□□ 0.42
TRIM47Q96LD4 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
TRIM47Q96LD4 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM47Q96LD4 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM47Q96LD4 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM47Q96LD4 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM47Q96LD4 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM47Q96LD4 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
TRIM47Q96LD4 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM47Q96LD4 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM47Q96LD4 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM47Q96LD4 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM47Q96LD4 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM47Q96LD4 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM47Q96LD4 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TRIM47Q96LD4 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TRIM47Q96LD4 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM47Q96LD4 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM47Q96LD4 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TRIM47Q96LD4 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM47Q96LD4 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM47Q96LD4 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TRIM47Q96LD4 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM47Q96LD4 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM47Q96LD4 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM47Q96LD4 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM47Q96LD4 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM47Q96LD4 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC17.65■□□□□ 0.42
TRIM47Q96LD4 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM47Q96LD4 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM47Q96LD4 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM47Q96LD4 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.65■□□□□ 0.42
TRIM47Q96LD4 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC17.65■□□□□ 0.42
TRIM47Q96LD4 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM47Q96LD4 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC17.65■□□□□ 0.42
TRIM47Q96LD4 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC17.65■□□□□ 0.42
TRIM47Q96LD4 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
TRIM47Q96LD4 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM47Q96LD4 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM47Q96LD4 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM47Q96LD4 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC17.65■□□□□ 0.42
TRIM47Q96LD4 Z97180.1-201ENST00000445173 988 ntBASIC17.65■□□□□ 0.42
TRIM47Q96LD4 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.65■□□□□ 0.42
TRIM47Q96LD4 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC17.65■□□□□ 0.42
TRIM47Q96LD4 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC17.65■□□□□ 0.42
TRIM47Q96LD4 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM47Q96LD4 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC17.65■□□□□ 0.42
TRIM47Q96LD4 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC17.65■□□□□ 0.42
TRIM47Q96LD4 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC17.65■□□□□ 0.42
TRIM47Q96LD4 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
TRIM47Q96LD4 PRKXP1-201ENST00000561423 1122 ntBASIC17.65■□□□□ 0.42
TRIM47Q96LD4 AC005730.2-201ENST00000564549 1184 ntBASIC17.65■□□□□ 0.42
TRIM47Q96LD4 RN7SL574P-201ENST00000581512 297 ntBASIC17.65■□□□□ 0.42
TRIM47Q96LD4 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TRIM47Q96LD4 AL133499.1-201ENST00000596207 608 ntBASIC17.65■□□□□ 0.42
TRIM47Q96LD4 API5-202ENST00000420461 2009 ntTSL 2 BASIC17.65■□□□□ 0.42
TRIM47Q96LD4 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TRIM47Q96LD4 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM47Q96LD4 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms