Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 GPS2P2-201ENST00000430745 888 ntBASIC13.22□□□□□ -0.29
FOXRED1Q96CU9 MTND6P24-201ENST00000440466 518 ntBASIC13.22□□□□□ -0.29
FOXRED1Q96CU9 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC13.22□□□□□ -0.29
FOXRED1Q96CU9 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.22□□□□□ -0.29
FOXRED1Q96CU9 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
FOXRED1Q96CU9 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.22□□□□□ -0.29
FOXRED1Q96CU9 AC069262.1-201ENST00000539058 672 ntBASIC13.22□□□□□ -0.29
FOXRED1Q96CU9 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
FOXRED1Q96CU9 VPS29-207ENST00000549970 818 ntTSL 3 BASIC13.22□□□□□ -0.29
FOXRED1Q96CU9 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.22□□□□□ -0.29
FOXRED1Q96CU9 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.22□□□□□ -0.29
FOXRED1Q96CU9 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.22□□□□□ -0.29
FOXRED1Q96CU9 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
FOXRED1Q96CU9 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.22□□□□□ -0.29
FOXRED1Q96CU9 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.22□□□□□ -0.29
FOXRED1Q96CU9 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
FOXRED1Q96CU9 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
FOXRED1Q96CU9 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
FOXRED1Q96CU9 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.22□□□□□ -0.29
FOXRED1Q96CU9 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
FOXRED1Q96CU9 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
FOXRED1Q96CU9 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
FOXRED1Q96CU9 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
FOXRED1Q96CU9 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.22□□□□□ -0.29
FOXRED1Q96CU9 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
FOXRED1Q96CU9 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
FOXRED1Q96CU9 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.22□□□□□ -0.29
FOXRED1Q96CU9 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
FOXRED1Q96CU9 AC055811.4-201ENST00000624039 1754 ntBASIC13.22□□□□□ -0.29
FOXRED1Q96CU9 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
FOXRED1Q96CU9 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
FOXRED1Q96CU9 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
FOXRED1Q96CU9 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
FOXRED1Q96CU9 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
FOXRED1Q96CU9 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
FOXRED1Q96CU9 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
FOXRED1Q96CU9 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
FOXRED1Q96CU9 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
FOXRED1Q96CU9 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.21□□□□□ -0.29
FOXRED1Q96CU9 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
FOXRED1Q96CU9 LINC01230-201ENST00000625222 3017 ntBASIC13.21□□□□□ -0.29
FOXRED1Q96CU9 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.21□□□□□ -0.29
FOXRED1Q96CU9 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
FOXRED1Q96CU9 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
FOXRED1Q96CU9 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
FOXRED1Q96CU9 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.21□□□□□ -0.29
FOXRED1Q96CU9 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
FOXRED1Q96CU9 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
FOXRED1Q96CU9 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.21□□□□□ -0.29
FOXRED1Q96CU9 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
FOXRED1Q96CU9 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
FOXRED1Q96CU9 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
FOXRED1Q96CU9 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
FOXRED1Q96CU9 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
FOXRED1Q96CU9 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
FOXRED1Q96CU9 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.21□□□□□ -0.29
FOXRED1Q96CU9 AC074338.1-201ENST00000416825 156 ntBASIC13.21□□□□□ -0.29
FOXRED1Q96CU9 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
FOXRED1Q96CU9 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
FOXRED1Q96CU9 AC125807.1-201ENST00000483097 614 ntBASIC13.21□□□□□ -0.29
FOXRED1Q96CU9 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC13.21□□□□□ -0.29
FOXRED1Q96CU9 AC109322.1-201ENST00000524499 1264 ntBASIC13.21□□□□□ -0.29
FOXRED1Q96CU9 AL079307.3-201ENST00000556114 283 ntBASIC13.21□□□□□ -0.29
FOXRED1Q96CU9 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.21□□□□□ -0.29
FOXRED1Q96CU9 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC13.21□□□□□ -0.29
FOXRED1Q96CU9 ORC5-208ENST00000626700 344 ntTSL 3 BASIC13.21□□□□□ -0.29
FOXRED1Q96CU9 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.21□□□□□ -0.29
FOXRED1Q96CU9 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC13.21□□□□□ -0.29
FOXRED1Q96CU9 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
FOXRED1Q96CU9 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
FOXRED1Q96CU9 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.21□□□□□ -0.29
FOXRED1Q96CU9 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
FOXRED1Q96CU9 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.21□□□□□ -0.29
FOXRED1Q96CU9 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
FOXRED1Q96CU9 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
FOXRED1Q96CU9 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.21□□□□□ -0.3
FOXRED1Q96CU9 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
FOXRED1Q96CU9 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
FOXRED1Q96CU9 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
FOXRED1Q96CU9 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
FOXRED1Q96CU9 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
FOXRED1Q96CU9 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.21□□□□□ -0.3
FOXRED1Q96CU9 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
FOXRED1Q96CU9 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
FOXRED1Q96CU9 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.21□□□□□ -0.3
FOXRED1Q96CU9 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
FOXRED1Q96CU9 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
FOXRED1Q96CU9 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 AC092135.3-201ENST00000624151 1846 ntBASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms