Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TTC28Q96AY4 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TTC28Q96AY4 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TTC28Q96AY4 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TTC28Q96AY4 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
TTC28Q96AY4 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TTC28Q96AY4 AL133373.2-201ENST00000623187 2828 ntBASIC14.87□□□□□ -0.03
TTC28Q96AY4 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.87□□□□□ -0.03
TTC28Q96AY4 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TTC28Q96AY4 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TTC28Q96AY4 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.87□□□□□ -0.03
TTC28Q96AY4 CCL17-201ENST00000219244 615 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TTC28Q96AY4 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TTC28Q96AY4 FXYD2-202ENST00000292079 571 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TTC28Q96AY4 PAX5-203ENST00000377847 996 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TTC28Q96AY4 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TTC28Q96AY4 PAX5-213ENST00000523145 830 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TTC28Q96AY4 CES1P2-201ENST00000566467 1242 ntBASIC14.87□□□□□ -0.03
TTC28Q96AY4 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TTC28Q96AY4 MIR4459-201ENST00000581837 66 ntBASIC14.87□□□□□ -0.03
TTC28Q96AY4 AC011483.3-201ENST00000601506 826 ntTSL 3 BASIC14.87□□□□□ -0.03
TTC28Q96AY4 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC14.87□□□□□ -0.03
TTC28Q96AY4 AC079779.4-201ENST00000619113 548 ntTSL 5 BASIC14.87□□□□□ -0.03
TTC28Q96AY4 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TTC28Q96AY4 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
TTC28Q96AY4 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TTC28Q96AY4 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.87□□□□□ -0.03
TTC28Q96AY4 DAP3-201ENST00000343043 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TTC28Q96AY4 RNF165-205ENST00000588679 2904 ntBASIC14.87□□□□□ -0.03
TTC28Q96AY4 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TTC28Q96AY4 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
TTC28Q96AY4 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TTC28Q96AY4 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TTC28Q96AY4 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TTC28Q96AY4 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TTC28Q96AY4 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC14.86□□□□□ -0.03
TTC28Q96AY4 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
TTC28Q96AY4 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TTC28Q96AY4 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.86□□□□□ -0.03
TTC28Q96AY4 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
TTC28Q96AY4 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TTC28Q96AY4 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TTC28Q96AY4 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC14.86□□□□□ -0.03
TTC28Q96AY4 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC14.86□□□□□ -0.03
TTC28Q96AY4 CYP4F29P-202ENST00000428301 1279 ntTSL 2 BASIC14.86□□□□□ -0.03
TTC28Q96AY4 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC14.86□□□□□ -0.03
TTC28Q96AY4 CNBP-202ENST00000441626 1040 ntTSL 2 BASIC14.86□□□□□ -0.03
TTC28Q96AY4 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC14.86□□□□□ -0.03
TTC28Q96AY4 DUX4L50-201ENST00000455245 715 ntBASIC14.86□□□□□ -0.03
TTC28Q96AY4 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC14.86□□□□□ -0.03
TTC28Q96AY4 NKAPP1-204ENST00000555168 557 ntTSL 4 BASIC14.86□□□□□ -0.03
TTC28Q96AY4 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TTC28Q96AY4 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC14.86□□□□□ -0.03
TTC28Q96AY4 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
TTC28Q96AY4 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
TTC28Q96AY4 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TTC28Q96AY4 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TTC28Q96AY4 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC14.86□□□□□ -0.03
TTC28Q96AY4 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.86□□□□□ -0.03
TTC28Q96AY4 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TTC28Q96AY4 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TTC28Q96AY4 CLUAP1-201ENST00000341633 1643 ntTSL 5 BASIC14.86□□□□□ -0.03
TTC28Q96AY4 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TTC28Q96AY4 LINC00449-201ENST00000366259 872 ntTSL 2 BASIC14.86□□□□□ -0.03
TTC28Q96AY4 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC14.86□□□□□ -0.03
TTC28Q96AY4 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC14.86□□□□□ -0.03
TTC28Q96AY4 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TTC28Q96AY4 AL080243.1-201ENST00000423293 1060 ntBASIC14.86□□□□□ -0.03
TTC28Q96AY4 TPT1P11-201ENST00000458482 498 ntBASIC14.86□□□□□ -0.03
TTC28Q96AY4 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC14.86□□□□□ -0.03
TTC28Q96AY4 HINT1-205ENST00000508488 703 ntTSL 2 BASIC14.86□□□□□ -0.03
TTC28Q96AY4 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TTC28Q96AY4 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TTC28Q96AY4 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC14.86□□□□□ -0.03
TTC28Q96AY4 AC092327.2-201ENST00000595705 901 ntTSL 3 BASIC14.86□□□□□ -0.03
TTC28Q96AY4 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TTC28Q96AY4 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TTC28Q96AY4 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TTC28Q96AY4 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TTC28Q96AY4 PLEKHG6-202ENST00000304581 1424 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TTC28Q96AY4 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TTC28Q96AY4 FAM226B-201ENST00000602508 1490 ntBASIC14.86□□□□□ -0.03
TTC28Q96AY4 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.86□□□□□ -0.03
TTC28Q96AY4 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
TTC28Q96AY4 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TTC28Q96AY4 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TTC28Q96AY4 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TTC28Q96AY4 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TTC28Q96AY4 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.85□□□□□ -0.03
TTC28Q96AY4 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TTC28Q96AY4 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TTC28Q96AY4 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
TTC28Q96AY4 RNF170-202ENST00000319073 1265 ntTSL 2 BASIC14.85□□□□□ -0.03
TTC28Q96AY4 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.85□□□□□ -0.03
TTC28Q96AY4 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC14.85□□□□□ -0.03
TTC28Q96AY4 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.85□□□□□ -0.03
TTC28Q96AY4 KCNC4-AS1-201ENST00000455967 748 ntTSL 2 BASIC14.85□□□□□ -0.03
TTC28Q96AY4 ALG1L7P-201ENST00000502317 768 ntBASIC14.85□□□□□ -0.03
TTC28Q96AY4 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC14.85□□□□□ -0.03
TTC28Q96AY4 EEF1AKMT3-203ENST00000548256 561 ntTSL 4 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms