Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SCAMP4Q969E2 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SCAMP4Q969E2 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.98□□□□□ -0.01
SCAMP4Q969E2 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC14.98□□□□□ -0.01
SCAMP4Q969E2 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SCAMP4Q969E2 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.97□□□□□ -0.01
SCAMP4Q969E2 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.97□□□□□ -0.01
SCAMP4Q969E2 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SCAMP4Q969E2 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SCAMP4Q969E2 INE2-201ENST00000630399 1874 ntBASIC14.97□□□□□ -0.01
SCAMP4Q969E2 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.97□□□□□ -0.01
SCAMP4Q969E2 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
SCAMP4Q969E2 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SCAMP4Q969E2 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SCAMP4Q969E2 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
SCAMP4Q969E2 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SCAMP4Q969E2 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
SCAMP4Q969E2 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SCAMP4Q969E2 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.97□□□□□ -0.01
SCAMP4Q969E2 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC14.97□□□□□ -0.01
SCAMP4Q969E2 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SCAMP4Q969E2 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SCAMP4Q969E2 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SCAMP4Q969E2 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
SCAMP4Q969E2 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.97□□□□□ -0.01
SCAMP4Q969E2 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SCAMP4Q969E2 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
SCAMP4Q969E2 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SCAMP4Q969E2 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SCAMP4Q969E2 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SCAMP4Q969E2 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC14.97□□□□□ -0.01
SCAMP4Q969E2 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SCAMP4Q969E2 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SCAMP4Q969E2 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14.97□□□□□ -0.01
SCAMP4Q969E2 AC007274.1-201ENST00000439805 662 ntBASIC14.97□□□□□ -0.01
SCAMP4Q969E2 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC14.97□□□□□ -0.01
SCAMP4Q969E2 MESTP3-201ENST00000503460 968 ntBASIC14.97□□□□□ -0.01
SCAMP4Q969E2 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC14.97□□□□□ -0.01
SCAMP4Q969E2 AL391280.1-201ENST00000506969 1062 ntBASIC14.97□□□□□ -0.01
SCAMP4Q969E2 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC14.97□□□□□ -0.01
SCAMP4Q969E2 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
SCAMP4Q969E2 AP003171.2-201ENST00000528208 925 ntBASIC14.97□□□□□ -0.01
SCAMP4Q969E2 AC023310.1-201ENST00000554836 735 ntBASIC14.97□□□□□ -0.01
SCAMP4Q969E2 HNRNPA1P48-202ENST00000565308 961 ntBASIC14.97□□□□□ -0.01
SCAMP4Q969E2 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.97□□□□□ -0.01
SCAMP4Q969E2 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.97□□□□□ -0.01
SCAMP4Q969E2 OR10B1P-201ENST00000601666 907 ntBASIC14.97□□□□□ -0.01
SCAMP4Q969E2 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SCAMP4Q969E2 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SCAMP4Q969E2 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.97□□□□□ -0.01
SCAMP4Q969E2 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC14.97□□□□□ -0.01
SCAMP4Q969E2 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SCAMP4Q969E2 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.97□□□□□ -0.01
SCAMP4Q969E2 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SCAMP4Q969E2 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SCAMP4Q969E2 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.97□□□□□ -0.01
SCAMP4Q969E2 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SCAMP4Q969E2 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SCAMP4Q969E2 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
SCAMP4Q969E2 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SCAMP4Q969E2 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SCAMP4Q969E2 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SCAMP4Q969E2 AC063926.3-201ENST00000624734 5658 ntBASIC14.97□□□□□ -0.01
SCAMP4Q969E2 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SCAMP4Q969E2 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
SCAMP4Q969E2 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SCAMP4Q969E2 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SCAMP4Q969E2 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SCAMP4Q969E2 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
SCAMP4Q969E2 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SCAMP4Q969E2 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
SCAMP4Q969E2 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SCAMP4Q969E2 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.96□□□□□ -0.01
SCAMP4Q969E2 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SCAMP4Q969E2 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.96□□□□□ -0.01
SCAMP4Q969E2 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SCAMP4Q969E2 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SCAMP4Q969E2 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.96□□□□□ -0.01
SCAMP4Q969E2 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SCAMP4Q969E2 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.96□□□□□ -0.01
SCAMP4Q969E2 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SCAMP4Q969E2 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SCAMP4Q969E2 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.96□□□□□ -0.01
SCAMP4Q969E2 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.96□□□□□ -0.01
SCAMP4Q969E2 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC14.96□□□□□ -0.01
SCAMP4Q969E2 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC14.96□□□□□ -0.01
SCAMP4Q969E2 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.96□□□□□ -0.01
SCAMP4Q969E2 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SCAMP4Q969E2 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SCAMP4Q969E2 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.96□□□□□ -0.01
SCAMP4Q969E2 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.96□□□□□ -0.01
SCAMP4Q969E2 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.96□□□□□ -0.01
SCAMP4Q969E2 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.96□□□□□ -0.01
SCAMP4Q969E2 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
SCAMP4Q969E2 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
SCAMP4Q969E2 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SCAMP4Q969E2 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
SCAMP4Q969E2 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.96□□□□□ -0.01
SCAMP4Q969E2 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SCAMP4Q969E2 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms