Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SIMC1Q8NDZ2 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SIMC1Q8NDZ2 C1QBPP1-201ENST00000400117 770 ntBASIC14.3□□□□□ -0.12
SIMC1Q8NDZ2 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.3□□□□□ -0.12
SIMC1Q8NDZ2 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.3□□□□□ -0.12
SIMC1Q8NDZ2 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SIMC1Q8NDZ2 AL442647.2-201ENST00000429864 857 ntBASIC14.3□□□□□ -0.12
SIMC1Q8NDZ2 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.3□□□□□ -0.12
SIMC1Q8NDZ2 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SIMC1Q8NDZ2 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
SIMC1Q8NDZ2 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SIMC1Q8NDZ2 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SIMC1Q8NDZ2 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.3□□□□□ -0.12
SIMC1Q8NDZ2 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SIMC1Q8NDZ2 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
SIMC1Q8NDZ2 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
SIMC1Q8NDZ2 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SIMC1Q8NDZ2 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SIMC1Q8NDZ2 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SIMC1Q8NDZ2 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
SIMC1Q8NDZ2 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SIMC1Q8NDZ2 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.3□□□□□ -0.12
SIMC1Q8NDZ2 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SIMC1Q8NDZ2 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SIMC1Q8NDZ2 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SIMC1Q8NDZ2 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SIMC1Q8NDZ2 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.3□□□□□ -0.12
SIMC1Q8NDZ2 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SIMC1Q8NDZ2 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SIMC1Q8NDZ2 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SIMC1Q8NDZ2 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.3□□□□□ -0.12
SIMC1Q8NDZ2 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SIMC1Q8NDZ2 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SIMC1Q8NDZ2 OR2I1P-210ENST00000642037 4691 ntBASIC14.3□□□□□ -0.12
SIMC1Q8NDZ2 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SIMC1Q8NDZ2 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.3□□□□□ -0.12
SIMC1Q8NDZ2 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.3□□□□□ -0.12
SIMC1Q8NDZ2 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SIMC1Q8NDZ2 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SIMC1Q8NDZ2 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.29□□□□□ -0.12
SIMC1Q8NDZ2 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SIMC1Q8NDZ2 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.29□□□□□ -0.12
SIMC1Q8NDZ2 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SIMC1Q8NDZ2 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SIMC1Q8NDZ2 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SIMC1Q8NDZ2 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.29□□□□□ -0.12
SIMC1Q8NDZ2 OR8S1-201ENST00000310194 1080 ntBASIC14.29□□□□□ -0.12
SIMC1Q8NDZ2 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.29□□□□□ -0.12
SIMC1Q8NDZ2 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
SIMC1Q8NDZ2 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.29□□□□□ -0.12
SIMC1Q8NDZ2 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SIMC1Q8NDZ2 AC007274.1-201ENST00000439805 662 ntBASIC14.29□□□□□ -0.12
SIMC1Q8NDZ2 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.29□□□□□ -0.12
SIMC1Q8NDZ2 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.29□□□□□ -0.12
SIMC1Q8NDZ2 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.29□□□□□ -0.12
SIMC1Q8NDZ2 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.29□□□□□ -0.12
SIMC1Q8NDZ2 CR383656.12-201ENST00000549567 513 ntBASIC14.29□□□□□ -0.12
SIMC1Q8NDZ2 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.29□□□□□ -0.12
SIMC1Q8NDZ2 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SIMC1Q8NDZ2 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.29□□□□□ -0.12
SIMC1Q8NDZ2 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.29□□□□□ -0.12
SIMC1Q8NDZ2 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.29□□□□□ -0.12
SIMC1Q8NDZ2 MIR6752-201ENST00000618442 71 ntBASIC14.29□□□□□ -0.12
SIMC1Q8NDZ2 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SIMC1Q8NDZ2 RPSAP52-203ENST00000622976 1023 ntBASIC14.29□□□□□ -0.12
SIMC1Q8NDZ2 AC005252.2-201ENST00000624630 1141 ntBASIC14.29□□□□□ -0.12
SIMC1Q8NDZ2 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.29□□□□□ -0.12
SIMC1Q8NDZ2 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SIMC1Q8NDZ2 WASH3P-207ENST00000560956 1394 ntBASIC14.29□□□□□ -0.12
SIMC1Q8NDZ2 KRT8P22-201ENST00000562317 1415 ntBASIC14.29□□□□□ -0.12
SIMC1Q8NDZ2 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.29□□□□□ -0.12
SIMC1Q8NDZ2 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
SIMC1Q8NDZ2 AC012508.2-201ENST00000567613 1472 ntBASIC14.29□□□□□ -0.12
SIMC1Q8NDZ2 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SIMC1Q8NDZ2 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SIMC1Q8NDZ2 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SIMC1Q8NDZ2 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SIMC1Q8NDZ2 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SIMC1Q8NDZ2 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SIMC1Q8NDZ2 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SIMC1Q8NDZ2 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SIMC1Q8NDZ2 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SIMC1Q8NDZ2 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SIMC1Q8NDZ2 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC14.29□□□□□ -0.12
SIMC1Q8NDZ2 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SIMC1Q8NDZ2 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SIMC1Q8NDZ2 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.29□□□□□ -0.12
SIMC1Q8NDZ2 AL390755.1-201ENST00000623716 2027 ntBASIC14.29□□□□□ -0.12
SIMC1Q8NDZ2 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SIMC1Q8NDZ2 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SIMC1Q8NDZ2 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SIMC1Q8NDZ2 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SIMC1Q8NDZ2 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SIMC1Q8NDZ2 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
SIMC1Q8NDZ2 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.28□□□□□ -0.12
SIMC1Q8NDZ2 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.28□□□□□ -0.12
SIMC1Q8NDZ2 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SIMC1Q8NDZ2 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
SIMC1Q8NDZ2 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SIMC1Q8NDZ2 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms