Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
LTBP4Q8N2S1 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LTBP4Q8N2S1 LILRP2-202ENST00000413572 1383 ntBASIC20.04■□□□□ 0.8
LTBP4Q8N2S1 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LTBP4Q8N2S1 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC20.04■□□□□ 0.8
LTBP4Q8N2S1 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC20.03■□□□□ 0.8
LTBP4Q8N2S1 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LTBP4Q8N2S1 AC099398.1-201ENST00000567919 2776 ntBASIC20.03■□□□□ 0.8
LTBP4Q8N2S1 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LTBP4Q8N2S1 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC20.03■□□□□ 0.8
LTBP4Q8N2S1 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC20.03■□□□□ 0.8
LTBP4Q8N2S1 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC20.03■□□□□ 0.8
LTBP4Q8N2S1 MCRS1-203ENST00000546244 1686 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LTBP4Q8N2S1 RNF170-202ENST00000319073 1265 ntTSL 2 BASIC20.03■□□□□ 0.8
LTBP4Q8N2S1 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
LTBP4Q8N2S1 MRPL48-203ENST00000398483 1058 ntTSL 3 BASIC20.03■□□□□ 0.8
LTBP4Q8N2S1 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC20.03■□□□□ 0.8
LTBP4Q8N2S1 AC092573.1-201ENST00000433054 884 ntBASIC20.03■□□□□ 0.8
LTBP4Q8N2S1 AL136084.1-201ENST00000449172 318 ntBASIC20.03■□□□□ 0.8
LTBP4Q8N2S1 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
LTBP4Q8N2S1 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
LTBP4Q8N2S1 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
LTBP4Q8N2S1 LINC00643-202ENST00000553426 526 ntTSL 3 BASIC20.03■□□□□ 0.8
LTBP4Q8N2S1 BATF-202ENST00000555504 361 ntTSL 2 BASIC20.03■□□□□ 0.8
LTBP4Q8N2S1 ZNF677-210ENST00000601413 706 ntTSL 2 BASIC20.03■□□□□ 0.8
LTBP4Q8N2S1 HPX-213ENST00000615166 826 ntTSL 5 BASIC20.03■□□□□ 0.8
LTBP4Q8N2S1 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC20.03■□□□□ 0.8
LTBP4Q8N2S1 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LTBP4Q8N2S1 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LTBP4Q8N2S1 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LTBP4Q8N2S1 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LTBP4Q8N2S1 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
LTBP4Q8N2S1 LILRP1-201ENST00000444199 1370 ntBASIC20.03■□□□□ 0.8
LTBP4Q8N2S1 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
LTBP4Q8N2S1 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
LTBP4Q8N2S1 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LTBP4Q8N2S1 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LTBP4Q8N2S1 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
LTBP4Q8N2S1 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.03■□□□□ 0.8
LTBP4Q8N2S1 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC20.03■□□□□ 0.8
LTBP4Q8N2S1 GH1-203ENST00000351388 685 ntTSL 2 BASIC20.02■□□□□ 0.8
LTBP4Q8N2S1 KRT18P33-201ENST00000398525 1043 ntBASIC20.02■□□□□ 0.8
LTBP4Q8N2S1 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC20.02■□□□□ 0.8
LTBP4Q8N2S1 AC103563.1-201ENST00000429316 123 ntBASIC20.02■□□□□ 0.8
LTBP4Q8N2S1 YY1P2-201ENST00000438766 948 ntBASIC20.02■□□□□ 0.8
LTBP4Q8N2S1 HNRNPA1P56-201ENST00000505767 954 ntBASIC20.02■□□□□ 0.8
LTBP4Q8N2S1 AL359219.1-201ENST00000556311 934 ntBASIC20.02■□□□□ 0.8
LTBP4Q8N2S1 AC009065.4-201ENST00000563734 543 ntTSL 3 BASIC20.02■□□□□ 0.8
LTBP4Q8N2S1 AC100786.1-201ENST00000583018 513 ntTSL 3 BASIC20.02■□□□□ 0.8
LTBP4Q8N2S1 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LTBP4Q8N2S1 AL591471.1-201ENST00000621855 229 ntBASIC20.02■□□□□ 0.8
LTBP4Q8N2S1 NOC2LP2-201ENST00000407594 1944 ntBASIC20.02■□□□□ 0.8
LTBP4Q8N2S1 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LTBP4Q8N2S1 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LTBP4Q8N2S1 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
LTBP4Q8N2S1 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
LTBP4Q8N2S1 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LTBP4Q8N2S1 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LTBP4Q8N2S1 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
LTBP4Q8N2S1 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LTBP4Q8N2S1 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LTBP4Q8N2S1 AC009090.5-201ENST00000624886 2285 ntBASIC20.02■□□□□ 0.79
LTBP4Q8N2S1 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
LTBP4Q8N2S1 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC20.02■□□□□ 0.79
LTBP4Q8N2S1 AC079325.1-201ENST00000430386 857 ntBASIC20.02■□□□□ 0.79
LTBP4Q8N2S1 RN7SL838P-201ENST00000481676 295 ntBASIC20.02■□□□□ 0.79
LTBP4Q8N2S1 MARK2P17-201ENST00000498560 841 ntBASIC20.02■□□□□ 0.79
LTBP4Q8N2S1 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC20.02■□□□□ 0.79
LTBP4Q8N2S1 INCA1-204ENST00000576820 973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
LTBP4Q8N2S1 AC048380.1-201ENST00000589818 465 ntTSL 3 BASIC20.02■□□□□ 0.79
LTBP4Q8N2S1 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC20.02■□□□□ 0.79
LTBP4Q8N2S1 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC20.02■□□□□ 0.79
LTBP4Q8N2S1 IP6K2-211ENST00000432678 1309 ntTSL 2 BASIC20.02■□□□□ 0.79
LTBP4Q8N2S1 PDXDC2P-206ENST00000534700 1315 ntBASIC20.02■□□□□ 0.79
LTBP4Q8N2S1 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC20.02■□□□□ 0.79
LTBP4Q8N2S1 TSGA13-201ENST00000356588 1372 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
LTBP4Q8N2S1 CLP1-202ENST00000525602 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
LTBP4Q8N2S1 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
LTBP4Q8N2S1 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LTBP4Q8N2S1 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
LTBP4Q8N2S1 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC20.01■□□□□ 0.79
LTBP4Q8N2S1 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
LTBP4Q8N2S1 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LTBP4Q8N2S1 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
LTBP4Q8N2S1 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
LTBP4Q8N2S1 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LTBP4Q8N2S1 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LTBP4Q8N2S1 PRDX2-202ENST00000334482 784 ntTSL 3 BASIC20.01■□□□□ 0.79
LTBP4Q8N2S1 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
LTBP4Q8N2S1 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
LTBP4Q8N2S1 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
LTBP4Q8N2S1 TISP43-202ENST00000409982 1039 ntAPPRIS P5 TSL 1 (best) BASIC20.01■□□□□ 0.79
LTBP4Q8N2S1 AC000077.1-201ENST00000420012 953 ntBASIC20.01■□□□□ 0.79
LTBP4Q8N2S1 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LTBP4Q8N2S1 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC20.01■□□□□ 0.79
LTBP4Q8N2S1 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LTBP4Q8N2S1 CETN3-205ENST00000522842 664 ntTSL 2 BASIC20.01■□□□□ 0.79
LTBP4Q8N2S1 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC20.01■□□□□ 0.79
LTBP4Q8N2S1 Metazoa_SRP.173-201ENST00000614020 273 ntBASIC20.01■□□□□ 0.79
LTBP4Q8N2S1 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms