Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC83Q8IWF9 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC83Q8IWF9 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC83Q8IWF9 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC83Q8IWF9 API5-203ENST00000455725 2257 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC83Q8IWF9 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC83Q8IWF9 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC83Q8IWF9 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC83Q8IWF9 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
CCDC83Q8IWF9 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC83Q8IWF9 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CCDC83Q8IWF9 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC83Q8IWF9 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC83Q8IWF9 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
CCDC83Q8IWF9 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CCDC83Q8IWF9 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CCDC83Q8IWF9 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.77■□□□□ 0.44
CCDC83Q8IWF9 UGT1A2P-201ENST00000454886 866 ntBASIC17.77■□□□□ 0.44
CCDC83Q8IWF9 CD81-207ENST00000481687 890 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC83Q8IWF9 RFPL4AP1-201ENST00000530883 850 ntBASIC17.77■□□□□ 0.44
CCDC83Q8IWF9 SPDYE22P-201ENST00000582158 798 ntBASIC17.77■□□□□ 0.44
CCDC83Q8IWF9 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC17.77■□□□□ 0.44
CCDC83Q8IWF9 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.77■□□□□ 0.44
CCDC83Q8IWF9 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.77■□□□□ 0.44
CCDC83Q8IWF9 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC83Q8IWF9 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC83Q8IWF9 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC83Q8IWF9 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CCDC83Q8IWF9 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC83Q8IWF9 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC83Q8IWF9 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC17.77■□□□□ 0.43
CCDC83Q8IWF9 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC83Q8IWF9 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC83Q8IWF9 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC83Q8IWF9 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
CCDC83Q8IWF9 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC83Q8IWF9 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC83Q8IWF9 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC17.76■□□□□ 0.43
CCDC83Q8IWF9 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC83Q8IWF9 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
CCDC83Q8IWF9 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CCDC83Q8IWF9 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC83Q8IWF9 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC83Q8IWF9 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC83Q8IWF9 OR2I1P-209ENST00000641730 5365 ntBASIC17.76■□□□□ 0.43
CCDC83Q8IWF9 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC83Q8IWF9 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC83Q8IWF9 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CCDC83Q8IWF9 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC83Q8IWF9 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC83Q8IWF9 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC83Q8IWF9 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CCDC83Q8IWF9 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CCDC83Q8IWF9 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC17.76■□□□□ 0.43
CCDC83Q8IWF9 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC83Q8IWF9 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC83Q8IWF9 OSM-203ENST00000403463 464 ntTSL 3 BASIC17.76■□□□□ 0.43
CCDC83Q8IWF9 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC17.76■□□□□ 0.43
CCDC83Q8IWF9 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.76■□□□□ 0.43
CCDC83Q8IWF9 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC83Q8IWF9 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC83Q8IWF9 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC17.76■□□□□ 0.43
CCDC83Q8IWF9 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.76■□□□□ 0.43
CCDC83Q8IWF9 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.76■□□□□ 0.43
CCDC83Q8IWF9 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC17.76■□□□□ 0.43
CCDC83Q8IWF9 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC83Q8IWF9 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CCDC83Q8IWF9 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC17.76■□□□□ 0.43
CCDC83Q8IWF9 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC83Q8IWF9 AMT-232ENST00000636199 1546 ntTSL 5 BASIC17.76■□□□□ 0.43
CCDC83Q8IWF9 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC83Q8IWF9 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC17.76■□□□□ 0.43
CCDC83Q8IWF9 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC83Q8IWF9 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC83Q8IWF9 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC83Q8IWF9 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CCDC83Q8IWF9 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC83Q8IWF9 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC83Q8IWF9 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC83Q8IWF9 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CCDC83Q8IWF9 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CCDC83Q8IWF9 KRT8P14-201ENST00000414254 1442 ntBASIC17.75■□□□□ 0.43
CCDC83Q8IWF9 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC83Q8IWF9 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC83Q8IWF9 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC83Q8IWF9 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CCDC83Q8IWF9 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC83Q8IWF9 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.75■□□□□ 0.43
CCDC83Q8IWF9 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC83Q8IWF9 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.75■□□□□ 0.43
CCDC83Q8IWF9 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC83Q8IWF9 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC83Q8IWF9 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC17.75■□□□□ 0.43
CCDC83Q8IWF9 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC83Q8IWF9 AC120045.2-201ENST00000567334 178 ntBASIC17.75■□□□□ 0.43
CCDC83Q8IWF9 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC83Q8IWF9 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.75■□□□□ 0.43
CCDC83Q8IWF9 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CCDC83Q8IWF9 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC17.75■□□□□ 0.43
CCDC83Q8IWF9 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms