Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.05■□□□□ 0.16
CCDC50Q8IVM0 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
CCDC50Q8IVM0 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC50Q8IVM0 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC16.05■□□□□ 0.16
CCDC50Q8IVM0 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
CCDC50Q8IVM0 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC16.05■□□□□ 0.16
CCDC50Q8IVM0 AC140479.7-201ENST00000636301 2332 ntBASIC16.05■□□□□ 0.16
CCDC50Q8IVM0 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CCDC50Q8IVM0 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC50Q8IVM0 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
CCDC50Q8IVM0 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC50Q8IVM0 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC50Q8IVM0 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.05■□□□□ 0.16
CCDC50Q8IVM0 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.05■□□□□ 0.16
CCDC50Q8IVM0 FAM86GP-201ENST00000448322 971 ntBASIC16.05■□□□□ 0.16
CCDC50Q8IVM0 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.05■□□□□ 0.16
CCDC50Q8IVM0 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.05■□□□□ 0.16
CCDC50Q8IVM0 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.05■□□□□ 0.16
CCDC50Q8IVM0 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.05■□□□□ 0.16
CCDC50Q8IVM0 TIMM17BP1-201ENST00000545713 516 ntBASIC16.05■□□□□ 0.16
CCDC50Q8IVM0 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.05■□□□□ 0.16
CCDC50Q8IVM0 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.05■□□□□ 0.16
CCDC50Q8IVM0 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.05■□□□□ 0.16
CCDC50Q8IVM0 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CCDC50Q8IVM0 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.05■□□□□ 0.16
CCDC50Q8IVM0 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.05■□□□□ 0.16
CCDC50Q8IVM0 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CCDC50Q8IVM0 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC16.05■□□□□ 0.16
CCDC50Q8IVM0 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC50Q8IVM0 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC50Q8IVM0 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC50Q8IVM0 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC50Q8IVM0 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC50Q8IVM0 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CCDC50Q8IVM0 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
CCDC50Q8IVM0 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC50Q8IVM0 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC16.05■□□□□ 0.16
CCDC50Q8IVM0 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC16.05■□□□□ 0.16
CCDC50Q8IVM0 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC50Q8IVM0 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CCDC50Q8IVM0 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CCDC50Q8IVM0 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC50Q8IVM0 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.04■□□□□ 0.16
CCDC50Q8IVM0 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC50Q8IVM0 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC50Q8IVM0 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.04■□□□□ 0.16
CCDC50Q8IVM0 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC16.04■□□□□ 0.16
CCDC50Q8IVM0 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CCDC50Q8IVM0 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC50Q8IVM0 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC50Q8IVM0 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC50Q8IVM0 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC16.04■□□□□ 0.16
CCDC50Q8IVM0 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC50Q8IVM0 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC50Q8IVM0 AC087499.5-201ENST00000452760 1342 ntBASIC16.04■□□□□ 0.16
CCDC50Q8IVM0 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC50Q8IVM0 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CCDC50Q8IVM0 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CCDC50Q8IVM0 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CCDC50Q8IVM0 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.04■□□□□ 0.16
CCDC50Q8IVM0 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CCDC50Q8IVM0 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC16.04■□□□□ 0.16
CCDC50Q8IVM0 TREML5P-201ENST00000421694 576 ntBASIC16.04■□□□□ 0.16
CCDC50Q8IVM0 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.04■□□□□ 0.16
CCDC50Q8IVM0 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC50Q8IVM0 AC067863.1-201ENST00000494933 530 ntBASIC16.04■□□□□ 0.16
CCDC50Q8IVM0 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.04■□□□□ 0.16
CCDC50Q8IVM0 IGHV3-42-201ENST00000520410 361 ntBASIC16.04■□□□□ 0.16
CCDC50Q8IVM0 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.04■□□□□ 0.16
CCDC50Q8IVM0 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.04■□□□□ 0.16
CCDC50Q8IVM0 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CCDC50Q8IVM0 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CCDC50Q8IVM0 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.04■□□□□ 0.16
CCDC50Q8IVM0 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.04■□□□□ 0.16
CCDC50Q8IVM0 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.04■□□□□ 0.16
CCDC50Q8IVM0 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.04■□□□□ 0.16
CCDC50Q8IVM0 AC093028.1-201ENST00000622998 982 ntBASIC16.04■□□□□ 0.16
CCDC50Q8IVM0 AL645728.2-202ENST00000641679 227 ntBASIC16.04■□□□□ 0.16
CCDC50Q8IVM0 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC50Q8IVM0 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC50Q8IVM0 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC50Q8IVM0 AC107918.4-201ENST00000641966 3141 ntBASIC16.04■□□□□ 0.16
CCDC50Q8IVM0 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC50Q8IVM0 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC50Q8IVM0 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC16.04■□□□□ 0.16
CCDC50Q8IVM0 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC50Q8IVM0 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.04■□□□□ 0.16
CCDC50Q8IVM0 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC50Q8IVM0 CICP20-201ENST00000443330 2801 ntBASIC16.04■□□□□ 0.16
CCDC50Q8IVM0 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC50Q8IVM0 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC16.04■□□□□ 0.16
CCDC50Q8IVM0 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC16.04■□□□□ 0.16
CCDC50Q8IVM0 AC117489.1-201ENST00000625169 3217 ntBASIC16.04■□□□□ 0.16
CCDC50Q8IVM0 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC50Q8IVM0 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CCDC50Q8IVM0 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC16.03■□□□□ 0.16
CCDC50Q8IVM0 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC50Q8IVM0 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC50Q8IVM0 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.03■□□□□ 0.16
CCDC50Q8IVM0 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms