Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CTR9Q6PD62 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC17.92■□□□□ 0.46
CTR9Q6PD62 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CTR9Q6PD62 FTLP10-202ENST00000505798 471 ntBASIC17.92■□□□□ 0.46
CTR9Q6PD62 COX5BP1-201ENST00000507622 393 ntBASIC17.92■□□□□ 0.46
CTR9Q6PD62 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC17.92■□□□□ 0.46
CTR9Q6PD62 AP006547.1-201ENST00000563435 692 ntBASIC17.92■□□□□ 0.46
CTR9Q6PD62 MIR4538-201ENST00000581377 78 ntBASIC17.92■□□□□ 0.46
CTR9Q6PD62 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC17.92■□□□□ 0.46
CTR9Q6PD62 AC126755.1-201ENST00000525846 6405 ntBASIC17.92■□□□□ 0.46
CTR9Q6PD62 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CTR9Q6PD62 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC17.92■□□□□ 0.46
CTR9Q6PD62 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
CTR9Q6PD62 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CTR9Q6PD62 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CTR9Q6PD62 INE2-201ENST00000630399 1874 ntBASIC17.92■□□□□ 0.46
CTR9Q6PD62 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTR9Q6PD62 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC17.92■□□□□ 0.46
CTR9Q6PD62 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTR9Q6PD62 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTR9Q6PD62 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CTR9Q6PD62 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTR9Q6PD62 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTR9Q6PD62 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CTR9Q6PD62 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTR9Q6PD62 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CTR9Q6PD62 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTR9Q6PD62 ING5-213ENST00000636051 4199 ntTSL 5 BASIC17.91■□□□□ 0.46
CTR9Q6PD62 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.91■□□□□ 0.46
CTR9Q6PD62 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTR9Q6PD62 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CTR9Q6PD62 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTR9Q6PD62 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC17.91■□□□□ 0.46
CTR9Q6PD62 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CTR9Q6PD62 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC17.91■□□□□ 0.46
CTR9Q6PD62 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC17.91■□□□□ 0.46
CTR9Q6PD62 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC17.91■□□□□ 0.46
CTR9Q6PD62 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CTR9Q6PD62 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC17.91■□□□□ 0.46
CTR9Q6PD62 HOMER2P2-201ENST00000451621 847 ntBASIC17.91■□□□□ 0.46
CTR9Q6PD62 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC17.91■□□□□ 0.46
CTR9Q6PD62 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC17.91■□□□□ 0.46
CTR9Q6PD62 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC17.91■□□□□ 0.46
CTR9Q6PD62 ACR-203ENST00000529621 708 ntTSL 5 BASIC17.91■□□□□ 0.46
CTR9Q6PD62 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC17.91■□□□□ 0.46
CTR9Q6PD62 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC17.91■□□□□ 0.46
CTR9Q6PD62 RN7SL713P-201ENST00000582127 302 ntBASIC17.91■□□□□ 0.46
CTR9Q6PD62 AC023090.2-201ENST00000625182 2110 ntBASIC17.91■□□□□ 0.46
CTR9Q6PD62 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC17.91■□□□□ 0.46
CTR9Q6PD62 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC17.91■□□□□ 0.46
CTR9Q6PD62 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTR9Q6PD62 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTR9Q6PD62 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CTR9Q6PD62 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC17.91■□□□□ 0.46
CTR9Q6PD62 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CTR9Q6PD62 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTR9Q6PD62 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC17.91■□□□□ 0.46
CTR9Q6PD62 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CTR9Q6PD62 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC17.9■□□□□ 0.46
CTR9Q6PD62 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CTR9Q6PD62 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC17.9■□□□□ 0.46
CTR9Q6PD62 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC17.9■□□□□ 0.46
CTR9Q6PD62 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTR9Q6PD62 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTR9Q6PD62 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTR9Q6PD62 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTR9Q6PD62 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CTR9Q6PD62 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTR9Q6PD62 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTR9Q6PD62 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CTR9Q6PD62 GOLGA2P4-201ENST00000441462 777 ntBASIC17.9■□□□□ 0.46
CTR9Q6PD62 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC17.9■□□□□ 0.46
CTR9Q6PD62 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC17.9■□□□□ 0.46
CTR9Q6PD62 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CTR9Q6PD62 FAM86HP-204ENST00000513466 959 ntBASIC17.9■□□□□ 0.46
CTR9Q6PD62 RIT1-205ENST00000539040 919 ntTSL 2 BASIC17.9■□□□□ 0.46
CTR9Q6PD62 USB1-203ENST00000539737 1212 ntTSL 2 BASIC17.9■□□□□ 0.46
CTR9Q6PD62 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC17.9■□□□□ 0.46
CTR9Q6PD62 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC17.9■□□□□ 0.46
CTR9Q6PD62 SLC9A7P1-201ENST00000554295 3311 ntBASIC17.9■□□□□ 0.46
CTR9Q6PD62 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTR9Q6PD62 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CTR9Q6PD62 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC17.9■□□□□ 0.46
CTR9Q6PD62 FKBP4P6-201ENST00000457486 1332 ntBASIC17.9■□□□□ 0.46
CTR9Q6PD62 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC17.9■□□□□ 0.46
CTR9Q6PD62 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CTR9Q6PD62 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC17.9■□□□□ 0.46
CTR9Q6PD62 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CTR9Q6PD62 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CTR9Q6PD62 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC17.9■□□□□ 0.46
CTR9Q6PD62 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CTR9Q6PD62 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTR9Q6PD62 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CTR9Q6PD62 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTR9Q6PD62 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC17.89■□□□□ 0.46
CTR9Q6PD62 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CTR9Q6PD62 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC17.89■□□□□ 0.45
CTR9Q6PD62 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
CTR9Q6PD62 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CTR9Q6PD62 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms