Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RTL6Q6ICC9 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
RTL6Q6ICC9 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RTL6Q6ICC9 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RTL6Q6ICC9 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RTL6Q6ICC9 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
RTL6Q6ICC9 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
RTL6Q6ICC9 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC13.67□□□□□ -0.22
RTL6Q6ICC9 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RTL6Q6ICC9 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
RTL6Q6ICC9 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
RTL6Q6ICC9 CD8B2-202ENST00000417670 633 ntBASIC13.67□□□□□ -0.22
RTL6Q6ICC9 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC13.67□□□□□ -0.22
RTL6Q6ICC9 AC099548.2-209ENST00000480264 625 ntBASIC13.67□□□□□ -0.22
RTL6Q6ICC9 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.67□□□□□ -0.22
RTL6Q6ICC9 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RTL6Q6ICC9 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC13.67□□□□□ -0.22
RTL6Q6ICC9 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.67□□□□□ -0.22
RTL6Q6ICC9 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.67□□□□□ -0.22
RTL6Q6ICC9 C2orf69P2-201ENST00000562032 1123 ntBASIC13.67□□□□□ -0.22
RTL6Q6ICC9 ECM1P1-201ENST00000604092 1279 ntBASIC13.67□□□□□ -0.22
RTL6Q6ICC9 AL606495.2-201ENST00000605867 535 ntBASIC13.67□□□□□ -0.22
RTL6Q6ICC9 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RTL6Q6ICC9 SNX12-206ENST00000622259 661 ntTSL 5 BASIC13.67□□□□□ -0.22
RTL6Q6ICC9 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RTL6Q6ICC9 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.67□□□□□ -0.22
RTL6Q6ICC9 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RTL6Q6ICC9 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RTL6Q6ICC9 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.67□□□□□ -0.22
RTL6Q6ICC9 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
RTL6Q6ICC9 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RTL6Q6ICC9 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RTL6Q6ICC9 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RTL6Q6ICC9 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.67□□□□□ -0.22
RTL6Q6ICC9 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RTL6Q6ICC9 TNRC18P2-201ENST00000417666 2714 ntBASIC13.67□□□□□ -0.22
RTL6Q6ICC9 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RTL6Q6ICC9 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RTL6Q6ICC9 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
RTL6Q6ICC9 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
RTL6Q6ICC9 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.67□□□□□ -0.22
RTL6Q6ICC9 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RTL6Q6ICC9 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
RTL6Q6ICC9 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RTL6Q6ICC9 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RTL6Q6ICC9 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.66□□□□□ -0.22
RTL6Q6ICC9 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
RTL6Q6ICC9 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
RTL6Q6ICC9 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RTL6Q6ICC9 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RTL6Q6ICC9 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RTL6Q6ICC9 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RTL6Q6ICC9 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RTL6Q6ICC9 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.66□□□□□ -0.22
RTL6Q6ICC9 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
RTL6Q6ICC9 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RTL6Q6ICC9 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RTL6Q6ICC9 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RTL6Q6ICC9 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RTL6Q6ICC9 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
RTL6Q6ICC9 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.66□□□□□ -0.22
RTL6Q6ICC9 AL139094.1-201ENST00000405549 1188 ntBASIC13.66□□□□□ -0.22
RTL6Q6ICC9 MIR1247-201ENST00000408206 136 ntBASIC13.66□□□□□ -0.22
RTL6Q6ICC9 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.66□□□□□ -0.22
RTL6Q6ICC9 AC004066.1-201ENST00000502488 802 ntBASIC13.66□□□□□ -0.22
RTL6Q6ICC9 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC13.66□□□□□ -0.22
RTL6Q6ICC9 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RTL6Q6ICC9 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC13.66□□□□□ -0.22
RTL6Q6ICC9 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RTL6Q6ICC9 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC13.66□□□□□ -0.22
RTL6Q6ICC9 RN7SL48P-201ENST00000579283 293 ntBASIC13.66□□□□□ -0.22
RTL6Q6ICC9 MIR4741-201ENST00000579822 90 ntBASIC13.66□□□□□ -0.22
RTL6Q6ICC9 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.66□□□□□ -0.22
RTL6Q6ICC9 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.66□□□□□ -0.22
RTL6Q6ICC9 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.66□□□□□ -0.22
RTL6Q6ICC9 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC13.66□□□□□ -0.22
RTL6Q6ICC9 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.66□□□□□ -0.22
RTL6Q6ICC9 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RTL6Q6ICC9 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC13.66□□□□□ -0.22
RTL6Q6ICC9 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.66□□□□□ -0.22
RTL6Q6ICC9 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RTL6Q6ICC9 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RTL6Q6ICC9 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RTL6Q6ICC9 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RTL6Q6ICC9 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RTL6Q6ICC9 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RTL6Q6ICC9 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RTL6Q6ICC9 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RTL6Q6ICC9 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.66□□□□□ -0.22
RTL6Q6ICC9 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.66□□□□□ -0.22
RTL6Q6ICC9 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RTL6Q6ICC9 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.66□□□□□ -0.22
RTL6Q6ICC9 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RTL6Q6ICC9 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RTL6Q6ICC9 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.66□□□□□ -0.22
RTL6Q6ICC9 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
RTL6Q6ICC9 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RTL6Q6ICC9 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
RTL6Q6ICC9 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RTL6Q6ICC9 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms