Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRRK2Q5S007 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRRK2Q5S007 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LRRK2Q5S007 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC12.83□□□□□ -0.36
LRRK2Q5S007 BX088651.3-201ENST00000418155 352 ntBASIC12.83□□□□□ -0.36
LRRK2Q5S007 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC12.83□□□□□ -0.36
LRRK2Q5S007 TLE1P1-201ENST00000422965 589 ntBASIC12.83□□□□□ -0.36
LRRK2Q5S007 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
LRRK2Q5S007 GNG10P1-201ENST00000452289 199 ntBASIC12.83□□□□□ -0.36
LRRK2Q5S007 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC12.83□□□□□ -0.36
LRRK2Q5S007 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC12.83□□□□□ -0.36
LRRK2Q5S007 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC12.83□□□□□ -0.36
LRRK2Q5S007 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC12.83□□□□□ -0.36
LRRK2Q5S007 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC12.83□□□□□ -0.36
LRRK2Q5S007 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LRRK2Q5S007 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRRK2Q5S007 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LRRK2Q5S007 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LRRK2Q5S007 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
LRRK2Q5S007 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
LRRK2Q5S007 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC12.82□□□□□ -0.36
LRRK2Q5S007 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
LRRK2Q5S007 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC12.82□□□□□ -0.36
LRRK2Q5S007 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LRRK2Q5S007 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LRRK2Q5S007 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LRRK2Q5S007 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC12.82□□□□□ -0.36
LRRK2Q5S007 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC12.82□□□□□ -0.36
LRRK2Q5S007 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LRRK2Q5S007 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LRRK2Q5S007 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LRRK2Q5S007 IZUMO1R-201ENST00000328458 798 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
LRRK2Q5S007 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LRRK2Q5S007 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LRRK2Q5S007 RN7SL530P-201ENST00000485097 298 ntBASIC12.82□□□□□ -0.36
LRRK2Q5S007 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC12.82□□□□□ -0.36
LRRK2Q5S007 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
LRRK2Q5S007 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
LRRK2Q5S007 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LRRK2Q5S007 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LRRK2Q5S007 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LRRK2Q5S007 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
LRRK2Q5S007 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LRRK2Q5S007 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC12.82□□□□□ -0.36
LRRK2Q5S007 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LRRK2Q5S007 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.82□□□□□ -0.36
LRRK2Q5S007 API5-202ENST00000420461 2009 ntTSL 2 BASIC12.82□□□□□ -0.36
LRRK2Q5S007 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LRRK2Q5S007 RNVU1-8-201ENST00000364272 125 ntBASIC12.82□□□□□ -0.36
LRRK2Q5S007 KIR2DL4-207ENST00000396293 715 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LRRK2Q5S007 AC098934.1-203ENST00000442868 1262 ntBASIC12.82□□□□□ -0.36
LRRK2Q5S007 ERP29P1-201ENST00000442902 706 ntBASIC12.82□□□□□ -0.36
LRRK2Q5S007 AC027612.2-202ENST00000445955 1199 ntBASIC12.82□□□□□ -0.36
LRRK2Q5S007 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LRRK2Q5S007 AC006529.1-201ENST00000459978 637 ntBASIC12.82□□□□□ -0.36
LRRK2Q5S007 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LRRK2Q5S007 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC12.82□□□□□ -0.36
LRRK2Q5S007 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LRRK2Q5S007 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC12.82□□□□□ -0.36
LRRK2Q5S007 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC12.82□□□□□ -0.36
LRRK2Q5S007 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC12.82□□□□□ -0.36
LRRK2Q5S007 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LRRK2Q5S007 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LRRK2Q5S007 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LRRK2Q5S007 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
LRRK2Q5S007 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LRRK2Q5S007 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC12.81□□□□□ -0.36
LRRK2Q5S007 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
LRRK2Q5S007 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
LRRK2Q5S007 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LRRK2Q5S007 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LRRK2Q5S007 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LRRK2Q5S007 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LRRK2Q5S007 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LRRK2Q5S007 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
LRRK2Q5S007 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC12.81□□□□□ -0.36
LRRK2Q5S007 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC12.81□□□□□ -0.36
LRRK2Q5S007 GEMIN8P4-201ENST00000380526 729 ntBASIC12.81□□□□□ -0.36
LRRK2Q5S007 FAM9C-202ENST00000380625 1122 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LRRK2Q5S007 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC12.81□□□□□ -0.36
LRRK2Q5S007 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC12.81□□□□□ -0.36
LRRK2Q5S007 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LRRK2Q5S007 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC12.81□□□□□ -0.36
LRRK2Q5S007 AC013553.1-201ENST00000560906 267 ntBASIC12.81□□□□□ -0.36
LRRK2Q5S007 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LRRK2Q5S007 AC010503.4-201ENST00000615487 688 ntBASIC12.81□□□□□ -0.36
LRRK2Q5S007 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC12.81□□□□□ -0.36
LRRK2Q5S007 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC12.81□□□□□ -0.36
LRRK2Q5S007 AC110057.1-201ENST00000636031 898 ntBASIC12.81□□□□□ -0.36
LRRK2Q5S007 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
LRRK2Q5S007 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LRRK2Q5S007 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LRRK2Q5S007 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC12.81□□□□□ -0.36
LRRK2Q5S007 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LRRK2Q5S007 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LRRK2Q5S007 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC12.81□□□□□ -0.36
LRRK2Q5S007 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LRRK2Q5S007 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LRRK2Q5S007 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LRRK2Q5S007 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms