Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HERC4Q5GLZ8 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.92■□□□□ 0.3
HERC4Q5GLZ8 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HERC4Q5GLZ8 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HERC4Q5GLZ8 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HERC4Q5GLZ8 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HERC4Q5GLZ8 NUS1P3-201ENST00000423502 862 ntBASIC16.92■□□□□ 0.3
HERC4Q5GLZ8 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16.92■□□□□ 0.3
HERC4Q5GLZ8 KLF2P4-201ENST00000451959 1225 ntBASIC16.92■□□□□ 0.3
HERC4Q5GLZ8 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC16.92■□□□□ 0.3
HERC4Q5GLZ8 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.92■□□□□ 0.3
HERC4Q5GLZ8 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.92■□□□□ 0.3
HERC4Q5GLZ8 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC16.92■□□□□ 0.3
HERC4Q5GLZ8 RHOQP1-201ENST00000555758 579 ntBASIC16.92■□□□□ 0.3
HERC4Q5GLZ8 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.92■□□□□ 0.3
HERC4Q5GLZ8 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.92■□□□□ 0.3
HERC4Q5GLZ8 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.92■□□□□ 0.3
HERC4Q5GLZ8 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.92■□□□□ 0.3
HERC4Q5GLZ8 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.92■□□□□ 0.3
HERC4Q5GLZ8 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
HERC4Q5GLZ8 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC16.92■□□□□ 0.3
HERC4Q5GLZ8 AC013726.1-201ENST00000563747 2285 ntBASIC16.92■□□□□ 0.3
HERC4Q5GLZ8 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.92■□□□□ 0.3
HERC4Q5GLZ8 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HERC4Q5GLZ8 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.92■□□□□ 0.3
HERC4Q5GLZ8 FGD5P1-202ENST00000614866 2498 ntBASIC16.92■□□□□ 0.3
HERC4Q5GLZ8 MIR600HG-201ENST00000449175 5984 ntBASIC16.92■□□□□ 0.3
HERC4Q5GLZ8 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC16.92■□□□□ 0.3
HERC4Q5GLZ8 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HERC4Q5GLZ8 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.92■□□□□ 0.3
HERC4Q5GLZ8 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HERC4Q5GLZ8 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC16.91■□□□□ 0.3
HERC4Q5GLZ8 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HERC4Q5GLZ8 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
HERC4Q5GLZ8 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HERC4Q5GLZ8 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HERC4Q5GLZ8 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
HERC4Q5GLZ8 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HERC4Q5GLZ8 PDIA3P1-201ENST00000471856 1510 ntBASIC16.91■□□□□ 0.3
HERC4Q5GLZ8 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.91■□□□□ 0.3
HERC4Q5GLZ8 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HERC4Q5GLZ8 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
HERC4Q5GLZ8 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
HERC4Q5GLZ8 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HERC4Q5GLZ8 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HERC4Q5GLZ8 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.91■□□□□ 0.3
HERC4Q5GLZ8 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HERC4Q5GLZ8 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HERC4Q5GLZ8 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
HERC4Q5GLZ8 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC16.91■□□□□ 0.3
HERC4Q5GLZ8 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HERC4Q5GLZ8 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HERC4Q5GLZ8 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
HERC4Q5GLZ8 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HERC4Q5GLZ8 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HERC4Q5GLZ8 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
HERC4Q5GLZ8 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC16.91■□□□□ 0.3
HERC4Q5GLZ8 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HERC4Q5GLZ8 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HERC4Q5GLZ8 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC16.91■□□□□ 0.3
HERC4Q5GLZ8 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.91■□□□□ 0.3
HERC4Q5GLZ8 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC16.91■□□□□ 0.3
HERC4Q5GLZ8 AC108725.1-201ENST00000495472 409 ntBASIC16.91■□□□□ 0.3
HERC4Q5GLZ8 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
HERC4Q5GLZ8 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.91■□□□□ 0.3
HERC4Q5GLZ8 AC010319.3-201ENST00000597028 470 ntBASIC16.91■□□□□ 0.3
HERC4Q5GLZ8 AC233724.13-201ENST00000598383 410 ntBASIC16.91■□□□□ 0.3
HERC4Q5GLZ8 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HERC4Q5GLZ8 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HERC4Q5GLZ8 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HERC4Q5GLZ8 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
HERC4Q5GLZ8 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HERC4Q5GLZ8 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HERC4Q5GLZ8 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HERC4Q5GLZ8 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.91■□□□□ 0.3
HERC4Q5GLZ8 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HERC4Q5GLZ8 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
HERC4Q5GLZ8 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
HERC4Q5GLZ8 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.91■□□□□ 0.3
HERC4Q5GLZ8 CICP23-201ENST00000605013 2741 ntBASIC16.9■□□□□ 0.3
HERC4Q5GLZ8 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HERC4Q5GLZ8 AC018665.1-201ENST00000622927 1362 ntBASIC16.9■□□□□ 0.3
HERC4Q5GLZ8 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HERC4Q5GLZ8 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HERC4Q5GLZ8 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HERC4Q5GLZ8 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HERC4Q5GLZ8 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.9■□□□□ 0.3
HERC4Q5GLZ8 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HERC4Q5GLZ8 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.9■□□□□ 0.3
HERC4Q5GLZ8 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC16.9■□□□□ 0.3
HERC4Q5GLZ8 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HERC4Q5GLZ8 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HERC4Q5GLZ8 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HERC4Q5GLZ8 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.9■□□□□ 0.3
HERC4Q5GLZ8 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HERC4Q5GLZ8 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HERC4Q5GLZ8 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HERC4Q5GLZ8 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
HERC4Q5GLZ8 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HERC4Q5GLZ8 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms