Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC14.94□□□□□ -0.02
SRP54P61011 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC14.94□□□□□ -0.02
SRP54P61011 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SRP54P61011 GPR182-203ENST00000622922 591 ntBASIC14.94□□□□□ -0.02
SRP54P61011 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
SRP54P61011 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SRP54P61011 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.94□□□□□ -0.02
SRP54P61011 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SRP54P61011 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SRP54P61011 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SRP54P61011 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SRP54P61011 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SRP54P61011 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.94□□□□□ -0.02
SRP54P61011 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.94□□□□□ -0.02
SRP54P61011 AC144831.1-201ENST00000573312 2656 ntBASIC14.94□□□□□ -0.02
SRP54P61011 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SRP54P61011 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
SRP54P61011 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.94□□□□□ -0.02
SRP54P61011 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SRP54P61011 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SRP54P61011 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SRP54P61011 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SRP54P61011 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
SRP54P61011 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC14.93□□□□□ -0.02
SRP54P61011 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SRP54P61011 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SRP54P61011 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.93□□□□□ -0.02
SRP54P61011 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SRP54P61011 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SRP54P61011 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
SRP54P61011 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.93□□□□□ -0.02
SRP54P61011 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
SRP54P61011 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SRP54P61011 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SRP54P61011 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SRP54P61011 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.93□□□□□ -0.02
SRP54P61011 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SRP54P61011 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
SRP54P61011 BTBD6P1-201ENST00000412176 1267 ntBASIC14.93□□□□□ -0.02
SRP54P61011 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC14.93□□□□□ -0.02
SRP54P61011 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC14.93□□□□□ -0.02
SRP54P61011 POM121L8P-201ENST00000417732 1281 ntBASIC14.93□□□□□ -0.02
SRP54P61011 GOLGA2P4-201ENST00000441462 777 ntBASIC14.93□□□□□ -0.02
SRP54P61011 POM121L9P-203ENST00000441984 1285 ntBASIC14.93□□□□□ -0.02
SRP54P61011 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SRP54P61011 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SRP54P61011 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
SRP54P61011 NOP2-211ENST00000540228 668 ntTSL 2 BASIC14.93□□□□□ -0.02
SRP54P61011 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SRP54P61011 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.93□□□□□ -0.02
SRP54P61011 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SRP54P61011 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SRP54P61011 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SRP54P61011 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.93□□□□□ -0.02
SRP54P61011 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SRP54P61011 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
SRP54P61011 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.93□□□□□ -0.02
SRP54P61011 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SRP54P61011 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SRP54P61011 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SRP54P61011 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SRP54P61011 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
SRP54P61011 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
SRP54P61011 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SRP54P61011 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SRP54P61011 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SRP54P61011 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SRP54P61011 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
SRP54P61011 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
SRP54P61011 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.92□□□□□ -0.02
SRP54P61011 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SRP54P61011 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
SRP54P61011 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SRP54P61011 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SRP54P61011 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SRP54P61011 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SRP54P61011 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SRP54P61011 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SRP54P61011 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SRP54P61011 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SRP54P61011 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.92□□□□□ -0.02
SRP54P61011 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
SRP54P61011 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
SRP54P61011 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SRP54P61011 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.92□□□□□ -0.02
SRP54P61011 CNN2P10-201ENST00000443067 918 ntBASIC14.92□□□□□ -0.02
SRP54P61011 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.92□□□□□ -0.02
SRP54P61011 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SRP54P61011 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC14.92□□□□□ -0.02
SRP54P61011 ACR-203ENST00000529621 708 ntTSL 5 BASIC14.92□□□□□ -0.02
SRP54P61011 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
SRP54P61011 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC14.92□□□□□ -0.02
SRP54P61011 DUX4L47-201ENST00000566374 394 ntBASIC14.92□□□□□ -0.02
SRP54P61011 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.92□□□□□ -0.02
SRP54P61011 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC14.92□□□□□ -0.02
SRP54P61011 EEF1DP1-201ENST00000585891 896 ntBASIC14.92□□□□□ -0.02
SRP54P61011 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
SRP54P61011 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.92□□□□□ -0.02
SRP54P61011 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC14.92□□□□□ -0.02
SRP54P61011 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms