Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 AC003101.2-201ENST00000612557 442 ntBASIC12.4□□□□□ -0.42
SPCS3P61009 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC12.4□□□□□ -0.42
SPCS3P61009 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SPCS3P61009 TK1-203ENST00000588734 1681 ntTSL 2 BASIC12.4□□□□□ -0.42
SPCS3P61009 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC12.4□□□□□ -0.42
SPCS3P61009 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC12.4□□□□□ -0.42
SPCS3P61009 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
SPCS3P61009 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SPCS3P61009 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SPCS3P61009 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC12.4□□□□□ -0.42
SPCS3P61009 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
SPCS3P61009 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SPCS3P61009 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SPCS3P61009 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
SPCS3P61009 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC12.4□□□□□ -0.42
SPCS3P61009 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SPCS3P61009 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC12.4□□□□□ -0.43
SPCS3P61009 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC12.4□□□□□ -0.43
SPCS3P61009 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
SPCS3P61009 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
SPCS3P61009 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
SPCS3P61009 ZBTB45P1-201ENST00000452761 1456 ntBASIC12.4□□□□□ -0.43
SPCS3P61009 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
SPCS3P61009 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.39□□□□□ -0.43
SPCS3P61009 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC12.39□□□□□ -0.43
SPCS3P61009 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SPCS3P61009 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC12.39□□□□□ -0.43
SPCS3P61009 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SPCS3P61009 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SPCS3P61009 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SPCS3P61009 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SPCS3P61009 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SPCS3P61009 BX640514.1-201ENST00000583223 1918 ntBASIC12.39□□□□□ -0.43
SPCS3P61009 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SPCS3P61009 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SPCS3P61009 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
SPCS3P61009 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SPCS3P61009 RDX-218ENST00000544551 4117 ntTSL 2 BASIC12.39□□□□□ -0.43
SPCS3P61009 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SPCS3P61009 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SPCS3P61009 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SPCS3P61009 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
SPCS3P61009 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SPCS3P61009 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SPCS3P61009 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SPCS3P61009 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
SPCS3P61009 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SPCS3P61009 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC12.39□□□□□ -0.43
SPCS3P61009 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC12.39□□□□□ -0.43
SPCS3P61009 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC12.39□□□□□ -0.43
SPCS3P61009 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
SPCS3P61009 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC12.39□□□□□ -0.43
SPCS3P61009 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
SPCS3P61009 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC12.39□□□□□ -0.43
SPCS3P61009 RN7SL828P-201ENST00000607615 303 ntBASIC12.39□□□□□ -0.43
SPCS3P61009 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
SPCS3P61009 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SPCS3P61009 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SPCS3P61009 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SPCS3P61009 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
SPCS3P61009 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
SPCS3P61009 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC12.39□□□□□ -0.43
SPCS3P61009 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC12.39□□□□□ -0.43
SPCS3P61009 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SPCS3P61009 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC12.39□□□□□ -0.43
SPCS3P61009 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
SPCS3P61009 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SPCS3P61009 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SPCS3P61009 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
SPCS3P61009 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC12.39□□□□□ -0.43
SPCS3P61009 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
SPCS3P61009 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SPCS3P61009 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SPCS3P61009 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SPCS3P61009 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SPCS3P61009 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
SPCS3P61009 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC12.38□□□□□ -0.43
SPCS3P61009 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
SPCS3P61009 ABR-228ENST00000574437 3196 ntTSL 5 BASIC12.38□□□□□ -0.43
SPCS3P61009 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
SPCS3P61009 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SPCS3P61009 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC12.38□□□□□ -0.43
SPCS3P61009 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC12.38□□□□□ -0.43
SPCS3P61009 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC12.38□□□□□ -0.43
SPCS3P61009 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
SPCS3P61009 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SPCS3P61009 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SPCS3P61009 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC12.38□□□□□ -0.43
SPCS3P61009 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
SPCS3P61009 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SPCS3P61009 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
SPCS3P61009 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
SPCS3P61009 FANCC-210ENST00000490972 2709 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SPCS3P61009 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SPCS3P61009 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SPCS3P61009 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
SPCS3P61009 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SPCS3P61009 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
SPCS3P61009 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
SPCS3P61009 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms