Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP4BP1P59074 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP4BP1P59074 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC17.34■□□□□ 0.37
CHMP4BP1P59074 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CHMP4BP1P59074 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP4BP1P59074 OLR1-203ENST00000432556 950 ntTSL 2 BASIC17.34■□□□□ 0.37
CHMP4BP1P59074 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CHMP4BP1P59074 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC17.34■□□□□ 0.37
CHMP4BP1P59074 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC17.34■□□□□ 0.37
CHMP4BP1P59074 KRT18P25-201ENST00000508931 1278 ntBASIC17.34■□□□□ 0.37
CHMP4BP1P59074 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC17.34■□□□□ 0.37
CHMP4BP1P59074 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC17.34■□□□□ 0.37
CHMP4BP1P59074 AC079316.1-201ENST00000548397 411 ntBASIC17.34■□□□□ 0.37
CHMP4BP1P59074 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC17.34■□□□□ 0.37
CHMP4BP1P59074 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC17.34■□□□□ 0.37
CHMP4BP1P59074 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP4BP1P59074 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP4BP1P59074 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.34■□□□□ 0.37
CHMP4BP1P59074 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP4BP1P59074 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP4BP1P59074 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC17.34■□□□□ 0.37
CHMP4BP1P59074 LARP4-220ENST00000615080 856 ntTSL 5 BASIC17.34■□□□□ 0.37
CHMP4BP1P59074 AC005089.1-201ENST00000619486 2241 ntBASIC17.34■□□□□ 0.37
CHMP4BP1P59074 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.34■□□□□ 0.37
CHMP4BP1P59074 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP4BP1P59074 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC17.34■□□□□ 0.37
CHMP4BP1P59074 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC17.34■□□□□ 0.37
CHMP4BP1P59074 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC17.34■□□□□ 0.37
CHMP4BP1P59074 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP4BP1P59074 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP4BP1P59074 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP4BP1P59074 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
CHMP4BP1P59074 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC17.34■□□□□ 0.37
CHMP4BP1P59074 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC17.34■□□□□ 0.37
CHMP4BP1P59074 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
CHMP4BP1P59074 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHMP4BP1P59074 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC17.33■□□□□ 0.37
CHMP4BP1P59074 AL359258.3-201ENST00000622910 2331 ntBASIC17.33■□□□□ 0.37
CHMP4BP1P59074 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHMP4BP1P59074 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHMP4BP1P59074 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CHMP4BP1P59074 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHMP4BP1P59074 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC17.33■□□□□ 0.37
CHMP4BP1P59074 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHMP4BP1P59074 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
CHMP4BP1P59074 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
CHMP4BP1P59074 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHMP4BP1P59074 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CHMP4BP1P59074 AC020907.1-201ENST00000616460 1350 ntBASIC17.33■□□□□ 0.36
CHMP4BP1P59074 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHMP4BP1P59074 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHMP4BP1P59074 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CHMP4BP1P59074 FAM197Y7-201ENST00000432892 766 ntBASIC17.33■□□□□ 0.36
CHMP4BP1P59074 AC022137.2-201ENST00000503482 481 ntBASIC17.33■□□□□ 0.36
CHMP4BP1P59074 AHRR-211ENST00000515206 462 ntTSL 5 BASIC17.33■□□□□ 0.36
CHMP4BP1P59074 CD74-212ENST00000524315 584 ntTSL 5 BASIC17.33■□□□□ 0.36
CHMP4BP1P59074 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHMP4BP1P59074 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC17.33■□□□□ 0.36
CHMP4BP1P59074 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC17.33■□□□□ 0.36
CHMP4BP1P59074 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC17.33■□□□□ 0.36
CHMP4BP1P59074 MIR4741-201ENST00000579822 90 ntBASIC17.33■□□□□ 0.36
CHMP4BP1P59074 MIR4313-201ENST00000580760 101 ntBASIC17.33■□□□□ 0.36
CHMP4BP1P59074 GNRHR2-203ENST00000581100 1187 ntBASIC17.33■□□□□ 0.36
CHMP4BP1P59074 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC17.33■□□□□ 0.36
CHMP4BP1P59074 AC145423.3-201ENST00000615987 467 ntBASIC17.33■□□□□ 0.36
CHMP4BP1P59074 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC17.33■□□□□ 0.36
CHMP4BP1P59074 AC138951.2-201ENST00000623455 1161 ntBASIC17.33■□□□□ 0.36
CHMP4BP1P59074 POR-201ENST00000394893 2532 ntTSL 5 BASIC17.33■□□□□ 0.36
CHMP4BP1P59074 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC17.33■□□□□ 0.36
CHMP4BP1P59074 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHMP4BP1P59074 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHMP4BP1P59074 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHMP4BP1P59074 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHMP4BP1P59074 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHMP4BP1P59074 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CHMP4BP1P59074 LINC01101-201ENST00000622953 1884 ntBASIC17.33■□□□□ 0.36
CHMP4BP1P59074 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC17.33■□□□□ 0.36
CHMP4BP1P59074 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHMP4BP1P59074 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CHMP4BP1P59074 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC17.32■□□□□ 0.36
CHMP4BP1P59074 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP4BP1P59074 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CHMP4BP1P59074 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP4BP1P59074 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP4BP1P59074 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC17.32■□□□□ 0.36
CHMP4BP1P59074 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC17.32■□□□□ 0.36
CHMP4BP1P59074 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CHMP4BP1P59074 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP4BP1P59074 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC17.32■□□□□ 0.36
CHMP4BP1P59074 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP4BP1P59074 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP4BP1P59074 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP4BP1P59074 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.32■□□□□ 0.36
CHMP4BP1P59074 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC17.32■□□□□ 0.36
CHMP4BP1P59074 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC17.32■□□□□ 0.36
CHMP4BP1P59074 AL133267.1-201ENST00000398220 340 ntBASIC17.32■□□□□ 0.36
CHMP4BP1P59074 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP4BP1P59074 AL590640.2-201ENST00000457038 527 ntBASIC17.32■□□□□ 0.36
CHMP4BP1P59074 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC17.32■□□□□ 0.36
CHMP4BP1P59074 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms