Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CLDN2P57739 AL354877.1-201ENST00000424412 413 ntBASIC14.86□□□□□ -0.03
CLDN2P57739 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC14.86□□□□□ -0.03
CLDN2P57739 BX284668.4-201ENST00000453917 508 ntBASIC14.86□□□□□ -0.03
CLDN2P57739 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.86□□□□□ -0.03
CLDN2P57739 AC021723.1-201ENST00000486306 515 ntBASIC14.86□□□□□ -0.03
CLDN2P57739 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC14.86□□□□□ -0.03
CLDN2P57739 AC002472.3-201ENST00000640124 621 ntBASIC14.86□□□□□ -0.03
CLDN2P57739 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN2P57739 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.86□□□□□ -0.03
CLDN2P57739 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.86□□□□□ -0.03
CLDN2P57739 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
CLDN2P57739 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN2P57739 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CLDN2P57739 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN2P57739 AC073347.1-201ENST00000421633 2643 ntBASIC14.86□□□□□ -0.03
CLDN2P57739 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN2P57739 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN2P57739 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN2P57739 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN2P57739 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC14.86□□□□□ -0.03
CLDN2P57739 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.86□□□□□ -0.03
CLDN2P57739 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN2P57739 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.86□□□□□ -0.03
CLDN2P57739 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN2P57739 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN2P57739 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN2P57739 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN2P57739 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN2P57739 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.85□□□□□ -0.03
CLDN2P57739 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN2P57739 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.85□□□□□ -0.03
CLDN2P57739 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN2P57739 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC14.85□□□□□ -0.03
CLDN2P57739 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CLDN2P57739 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.85□□□□□ -0.03
CLDN2P57739 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN2P57739 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN2P57739 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN2P57739 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN2P57739 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC14.85□□□□□ -0.03
CLDN2P57739 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC14.85□□□□□ -0.03
CLDN2P57739 CSH2-202ENST00000345366 598 ntTSL 5 BASIC14.85□□□□□ -0.03
CLDN2P57739 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN2P57739 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC14.85□□□□□ -0.03
CLDN2P57739 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CLDN2P57739 SLC25A24P2-201ENST00000415059 510 ntBASIC14.85□□□□□ -0.03
CLDN2P57739 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC14.85□□□□□ -0.03
CLDN2P57739 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN2P57739 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC14.85□□□□□ -0.03
CLDN2P57739 AC084346.2-201ENST00000607097 949 ntBASIC14.85□□□□□ -0.03
CLDN2P57739 AC138696.2-201ENST00000607376 223 ntBASIC14.85□□□□□ -0.03
CLDN2P57739 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN2P57739 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN2P57739 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN2P57739 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN2P57739 TMBIM7P-203ENST00000641617 1718 ntBASIC14.85□□□□□ -0.03
CLDN2P57739 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN2P57739 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN2P57739 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN2P57739 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.85□□□□□ -0.03
CLDN2P57739 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN2P57739 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN2P57739 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.85□□□□□ -0.03
CLDN2P57739 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN2P57739 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.85□□□□□ -0.03
CLDN2P57739 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CLDN2P57739 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN2P57739 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.84□□□□□ -0.03
CLDN2P57739 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CLDN2P57739 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN2P57739 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN2P57739 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.84□□□□□ -0.03
CLDN2P57739 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN2P57739 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN2P57739 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN2P57739 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.84□□□□□ -0.03
CLDN2P57739 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN2P57739 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN2P57739 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.84□□□□□ -0.03
CLDN2P57739 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.84□□□□□ -0.03
CLDN2P57739 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.84□□□□□ -0.03
CLDN2P57739 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN2P57739 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN2P57739 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
CLDN2P57739 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN2P57739 EIF4HP1-201ENST00000453115 687 ntBASIC14.84□□□□□ -0.03
CLDN2P57739 RNMTL1P1-201ENST00000454103 560 ntBASIC14.84□□□□□ -0.03
CLDN2P57739 SERPINA13P-202ENST00000478994 924 ntBASIC14.84□□□□□ -0.03
CLDN2P57739 ADM-202ENST00000524948 584 ntTSL 2 BASIC14.84□□□□□ -0.03
CLDN2P57739 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC14.84□□□□□ -0.03
CLDN2P57739 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC14.84□□□□□ -0.03
CLDN2P57739 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.84□□□□□ -0.03
CLDN2P57739 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC14.84□□□□□ -0.03
CLDN2P57739 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CLDN2P57739 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CLDN2P57739 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.84□□□□□ -0.03
CLDN2P57739 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
CLDN2P57739 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN2P57739 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms