Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
APOC4P55056 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
APOC4P55056 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
APOC4P55056 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC11.07□□□□□ -0.64
APOC4P55056 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
APOC4P55056 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC11.07□□□□□ -0.64
APOC4P55056 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC11.06□□□□□ -0.64
APOC4P55056 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC11.06□□□□□ -0.64
APOC4P55056 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC11.06□□□□□ -0.64
APOC4P55056 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
APOC4P55056 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
APOC4P55056 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC11.06□□□□□ -0.64
APOC4P55056 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
APOC4P55056 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
APOC4P55056 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
APOC4P55056 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC11.06□□□□□ -0.64
APOC4P55056 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
APOC4P55056 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
APOC4P55056 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
APOC4P55056 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
APOC4P55056 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
APOC4P55056 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
APOC4P55056 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
APOC4P55056 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
APOC4P55056 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
APOC4P55056 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
APOC4P55056 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
APOC4P55056 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
APOC4P55056 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC11.06□□□□□ -0.64
APOC4P55056 FAM86MP-201ENST00000340703 885 ntBASIC11.06□□□□□ -0.64
APOC4P55056 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
APOC4P55056 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
APOC4P55056 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
APOC4P55056 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
APOC4P55056 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
APOC4P55056 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
APOC4P55056 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
APOC4P55056 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
APOC4P55056 OLR1-203ENST00000432556 950 ntTSL 2 BASIC11.06□□□□□ -0.64
APOC4P55056 CNN2P10-201ENST00000443067 918 ntBASIC11.06□□□□□ -0.64
APOC4P55056 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
APOC4P55056 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
APOC4P55056 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC11.06□□□□□ -0.64
APOC4P55056 FAM8A2P-201ENST00000528813 1142 ntBASIC11.06□□□□□ -0.64
APOC4P55056 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
APOC4P55056 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
APOC4P55056 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC11.06□□□□□ -0.64
APOC4P55056 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC11.06□□□□□ -0.64
APOC4P55056 HNRNPA1P48-202ENST00000565308 961 ntBASIC11.06□□□□□ -0.64
APOC4P55056 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC11.06□□□□□ -0.64
APOC4P55056 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
APOC4P55056 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC11.06□□□□□ -0.64
APOC4P55056 MIR4741-201ENST00000579822 90 ntBASIC11.06□□□□□ -0.64
APOC4P55056 RN7SL713P-201ENST00000582127 302 ntBASIC11.06□□□□□ -0.64
APOC4P55056 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
APOC4P55056 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC11.06□□□□□ -0.64
APOC4P55056 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC11.06□□□□□ -0.64
APOC4P55056 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
APOC4P55056 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC11.06□□□□□ -0.64
APOC4P55056 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC11.06□□□□□ -0.64
APOC4P55056 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
APOC4P55056 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC11.06□□□□□ -0.64
APOC4P55056 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
APOC4P55056 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC11.06□□□□□ -0.64
APOC4P55056 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC11.06□□□□□ -0.64
APOC4P55056 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
APOC4P55056 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC11.06□□□□□ -0.64
APOC4P55056 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
APOC4P55056 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
APOC4P55056 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
APOC4P55056 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
APOC4P55056 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC11.06□□□□□ -0.64
APOC4P55056 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
APOC4P55056 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
APOC4P55056 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
APOC4P55056 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
APOC4P55056 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
APOC4P55056 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC11.06□□□□□ -0.64
APOC4P55056 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
APOC4P55056 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
APOC4P55056 HLA-DQB2-231ENST00000435145 2026 ntBASIC11.06□□□□□ -0.64
APOC4P55056 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
APOC4P55056 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
APOC4P55056 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
APOC4P55056 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
APOC4P55056 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
APOC4P55056 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
APOC4P55056 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
APOC4P55056 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
APOC4P55056 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
APOC4P55056 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
APOC4P55056 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC11.05□□□□□ -0.64
APOC4P55056 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
APOC4P55056 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
APOC4P55056 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
APOC4P55056 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
APOC4P55056 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
APOC4P55056 AC015818.8-201ENST00000587907 1519 ntBASIC11.05□□□□□ -0.64
APOC4P55056 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
APOC4P55056 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC11.05□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms