Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAD23BP54727 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAD23BP54727 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAD23BP54727 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAD23BP54727 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC16.19■□□□□ 0.18
RAD23BP54727 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RAD23BP54727 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
RAD23BP54727 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAD23BP54727 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.19■□□□□ 0.18
RAD23BP54727 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAD23BP54727 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.19■□□□□ 0.18
RAD23BP54727 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.19■□□□□ 0.18
RAD23BP54727 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16.19■□□□□ 0.18
RAD23BP54727 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.19■□□□□ 0.18
RAD23BP54727 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.19■□□□□ 0.18
RAD23BP54727 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.19■□□□□ 0.18
RAD23BP54727 SLC25A47P1-201ENST00000531577 414 ntBASIC16.19■□□□□ 0.18
RAD23BP54727 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.19■□□□□ 0.18
RAD23BP54727 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC16.19■□□□□ 0.18
RAD23BP54727 AC015936.2-201ENST00000593177 259 ntBASIC16.19■□□□□ 0.18
RAD23BP54727 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.19■□□□□ 0.18
RAD23BP54727 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAD23BP54727 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAD23BP54727 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAD23BP54727 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC16.19■□□□□ 0.18
RAD23BP54727 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAD23BP54727 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
RAD23BP54727 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAD23BP54727 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAD23BP54727 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAD23BP54727 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAD23BP54727 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAD23BP54727 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAD23BP54727 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAD23BP54727 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAD23BP54727 CICP24-201ENST00000605464 2705 ntBASIC16.18■□□□□ 0.18
RAD23BP54727 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAD23BP54727 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAD23BP54727 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.18■□□□□ 0.18
RAD23BP54727 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.18■□□□□ 0.18
RAD23BP54727 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAD23BP54727 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAD23BP54727 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAD23BP54727 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAD23BP54727 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
RAD23BP54727 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAD23BP54727 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
RAD23BP54727 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
RAD23BP54727 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
RAD23BP54727 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAD23BP54727 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
RAD23BP54727 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
RAD23BP54727 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.18■□□□□ 0.18
RAD23BP54727 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.18■□□□□ 0.18
RAD23BP54727 KRT17P7-201ENST00000451704 1104 ntBASIC16.18■□□□□ 0.18
RAD23BP54727 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.18■□□□□ 0.18
RAD23BP54727 AC106760.1-201ENST00000508690 800 ntBASIC16.18■□□□□ 0.18
RAD23BP54727 AC022616.1-201ENST00000518688 554 ntBASIC16.18■□□□□ 0.18
RAD23BP54727 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.18■□□□□ 0.18
RAD23BP54727 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.18■□□□□ 0.18
RAD23BP54727 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAD23BP54727 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.18■□□□□ 0.18
RAD23BP54727 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.18■□□□□ 0.18
RAD23BP54727 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAD23BP54727 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
RAD23BP54727 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.18■□□□□ 0.18
RAD23BP54727 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAD23BP54727 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RAD23BP54727 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.18■□□□□ 0.18
RAD23BP54727 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAD23BP54727 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAD23BP54727 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAD23BP54727 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.18■□□□□ 0.18
RAD23BP54727 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAD23BP54727 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAD23BP54727 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAD23BP54727 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAD23BP54727 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RAD23BP54727 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.18■□□□□ 0.18
RAD23BP54727 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAD23BP54727 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAD23BP54727 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAD23BP54727 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
RAD23BP54727 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAD23BP54727 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RAD23BP54727 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
RAD23BP54727 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RAD23BP54727 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.17■□□□□ 0.18
RAD23BP54727 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAD23BP54727 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.17■□□□□ 0.18
RAD23BP54727 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAD23BP54727 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.17■□□□□ 0.18
RAD23BP54727 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RAD23BP54727 AC005089.1-201ENST00000619486 2241 ntBASIC16.17■□□□□ 0.18
RAD23BP54727 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAD23BP54727 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAD23BP54727 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RAD23BP54727 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
RAD23BP54727 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC16.17■□□□□ 0.18
RAD23BP54727 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms