Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.32□□□□□ -0.12
CLK1P49759 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.32□□□□□ -0.12
CLK1P49759 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CLK1P49759 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLK1P49759 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CLK1P49759 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.32□□□□□ -0.12
CLK1P49759 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLK1P49759 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLK1P49759 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.31□□□□□ -0.12
CLK1P49759 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
CLK1P49759 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLK1P49759 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.31□□□□□ -0.12
CLK1P49759 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
CLK1P49759 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.31□□□□□ -0.12
CLK1P49759 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLK1P49759 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC14.31□□□□□ -0.12
CLK1P49759 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLK1P49759 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CLK1P49759 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.31□□□□□ -0.12
CLK1P49759 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLK1P49759 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.31□□□□□ -0.12
CLK1P49759 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.31□□□□□ -0.12
CLK1P49759 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.31□□□□□ -0.12
CLK1P49759 PMS2P2-201ENST00000425039 1128 ntBASIC14.31□□□□□ -0.12
CLK1P49759 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.31□□□□□ -0.12
CLK1P49759 AC097493.3-201ENST00000509725 367 ntBASIC14.31□□□□□ -0.12
CLK1P49759 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.31□□□□□ -0.12
CLK1P49759 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.31□□□□□ -0.12
CLK1P49759 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.31□□□□□ -0.12
CLK1P49759 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLK1P49759 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.31□□□□□ -0.12
CLK1P49759 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.31□□□□□ -0.12
CLK1P49759 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CLK1P49759 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLK1P49759 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLK1P49759 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLK1P49759 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CLK1P49759 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.31□□□□□ -0.12
CLK1P49759 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLK1P49759 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLK1P49759 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLK1P49759 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.31□□□□□ -0.12
CLK1P49759 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.31□□□□□ -0.12
CLK1P49759 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLK1P49759 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLK1P49759 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLK1P49759 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CLK1P49759 AC023024.2-201ENST00000623561 1993 ntBASIC14.31□□□□□ -0.12
CLK1P49759 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.31□□□□□ -0.12
CLK1P49759 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLK1P49759 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLK1P49759 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
CLK1P49759 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLK1P49759 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CLK1P49759 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CLK1P49759 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLK1P49759 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CLK1P49759 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.3□□□□□ -0.12
CLK1P49759 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLK1P49759 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC14.3□□□□□ -0.12
CLK1P49759 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.3□□□□□ -0.12
CLK1P49759 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.3□□□□□ -0.12
CLK1P49759 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLK1P49759 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLK1P49759 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLK1P49759 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLK1P49759 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLK1P49759 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.3□□□□□ -0.12
CLK1P49759 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLK1P49759 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
CLK1P49759 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLK1P49759 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLK1P49759 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
CLK1P49759 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.3□□□□□ -0.12
CLK1P49759 MIR943-201ENST00000401286 94 ntBASIC14.3□□□□□ -0.12
CLK1P49759 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
CLK1P49759 RN7SL618P-201ENST00000477850 296 ntBASIC14.3□□□□□ -0.12
CLK1P49759 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.3□□□□□ -0.12
CLK1P49759 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.3□□□□□ -0.12
CLK1P49759 HNRNPUP1-201ENST00000554987 333 ntBASIC14.3□□□□□ -0.12
CLK1P49759 MIR4313-201ENST00000580760 101 ntBASIC14.3□□□□□ -0.12
CLK1P49759 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.3□□□□□ -0.12
CLK1P49759 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLK1P49759 AC097359.3-201ENST00000603982 1210 ntBASIC14.3□□□□□ -0.12
CLK1P49759 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.3□□□□□ -0.12
CLK1P49759 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLK1P49759 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLK1P49759 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLK1P49759 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CLK1P49759 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.3□□□□□ -0.12
CLK1P49759 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLK1P49759 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CLK1P49759 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLK1P49759 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.3□□□□□ -0.12
CLK1P49759 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLK1P49759 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLK1P49759 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.3□□□□□ -0.12
CLK1P49759 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.3□□□□□ -0.12
CLK1P49759 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC14.3□□□□□ -0.12
CLK1P49759 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms