Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SLC6A12P48065 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.53□□□□□ -0.08
SLC6A12P48065 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC6A12P48065 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
SLC6A12P48065 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC6A12P48065 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC6A12P48065 RN7SKP230-201ENST00000365642 335 ntBASIC14.53□□□□□ -0.08
SLC6A12P48065 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.53□□□□□ -0.08
SLC6A12P48065 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC6A12P48065 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.53□□□□□ -0.08
SLC6A12P48065 POM121L8P-201ENST00000417732 1281 ntBASIC14.53□□□□□ -0.08
SLC6A12P48065 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.53□□□□□ -0.08
SLC6A12P48065 AC245100.3-201ENST00000441281 285 ntBASIC14.53□□□□□ -0.08
SLC6A12P48065 POM121L9P-203ENST00000441984 1285 ntBASIC14.53□□□□□ -0.08
SLC6A12P48065 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
SLC6A12P48065 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.53□□□□□ -0.08
SLC6A12P48065 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SLC6A12P48065 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.53□□□□□ -0.08
SLC6A12P48065 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.53□□□□□ -0.08
SLC6A12P48065 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC6A12P48065 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.53□□□□□ -0.08
SLC6A12P48065 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SLC6A12P48065 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC6A12P48065 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SLC6A12P48065 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC6A12P48065 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC6A12P48065 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.53□□□□□ -0.08
SLC6A12P48065 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC6A12P48065 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC6A12P48065 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SLC6A12P48065 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.52□□□□□ -0.08
SLC6A12P48065 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.52□□□□□ -0.08
SLC6A12P48065 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SLC6A12P48065 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SLC6A12P48065 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.52□□□□□ -0.08
SLC6A12P48065 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.08
SLC6A12P48065 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SLC6A12P48065 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SLC6A12P48065 CLUHP2-201ENST00000426660 1303 ntBASIC14.52□□□□□ -0.08
SLC6A12P48065 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SLC6A12P48065 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.52□□□□□ -0.09
SLC6A12P48065 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SLC6A12P48065 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SLC6A12P48065 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.52□□□□□ -0.09
SLC6A12P48065 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.52□□□□□ -0.09
SLC6A12P48065 MESTP3-201ENST00000503460 968 ntBASIC14.52□□□□□ -0.09
SLC6A12P48065 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
SLC6A12P48065 AC022447.6-201ENST00000515522 438 ntBASIC14.52□□□□□ -0.09
SLC6A12P48065 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.52□□□□□ -0.09
SLC6A12P48065 AP001889.1-201ENST00000525414 633 ntBASIC14.52□□□□□ -0.09
SLC6A12P48065 AC131206.1-201ENST00000538078 1211 ntBASIC14.52□□□□□ -0.09
SLC6A12P48065 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.52□□□□□ -0.09
SLC6A12P48065 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.52□□□□□ -0.09
SLC6A12P48065 RN7SL48P-201ENST00000579283 293 ntBASIC14.52□□□□□ -0.09
SLC6A12P48065 GNRHR2-203ENST00000581100 1187 ntBASIC14.52□□□□□ -0.09
SLC6A12P48065 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.52□□□□□ -0.09
SLC6A12P48065 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SLC6A12P48065 AC027307.3-201ENST00000594262 1100 ntBASIC14.52□□□□□ -0.09
SLC6A12P48065 ENPP7P14-201ENST00000621765 1040 ntBASIC14.52□□□□□ -0.09
SLC6A12P48065 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.52□□□□□ -0.09
SLC6A12P48065 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.52□□□□□ -0.09
SLC6A12P48065 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.52□□□□□ -0.09
SLC6A12P48065 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.52□□□□□ -0.09
SLC6A12P48065 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
SLC6A12P48065 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SLC6A12P48065 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SLC6A12P48065 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SLC6A12P48065 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
SLC6A12P48065 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.51□□□□□ -0.09
SLC6A12P48065 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SLC6A12P48065 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.51□□□□□ -0.09
SLC6A12P48065 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.51□□□□□ -0.09
SLC6A12P48065 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
SLC6A12P48065 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
SLC6A12P48065 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.51□□□□□ -0.09
SLC6A12P48065 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
SLC6A12P48065 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
SLC6A12P48065 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
SLC6A12P48065 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.51□□□□□ -0.09
SLC6A12P48065 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SLC6A12P48065 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SLC6A12P48065 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SLC6A12P48065 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SLC6A12P48065 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SLC6A12P48065 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
SLC6A12P48065 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.51□□□□□ -0.09
SLC6A12P48065 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SLC6A12P48065 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.51□□□□□ -0.09
SLC6A12P48065 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.51□□□□□ -0.09
SLC6A12P48065 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.51□□□□□ -0.09
SLC6A12P48065 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.51□□□□□ -0.09
SLC6A12P48065 RN7SL752P-201ENST00000463779 287 ntBASIC14.51□□□□□ -0.09
SLC6A12P48065 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.51□□□□□ -0.09
SLC6A12P48065 AC106760.1-201ENST00000508690 800 ntBASIC14.51□□□□□ -0.09
SLC6A12P48065 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.51□□□□□ -0.09
SLC6A12P48065 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
SLC6A12P48065 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
SLC6A12P48065 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
SLC6A12P48065 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
SLC6A12P48065 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms