Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
RFC3P40938 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC13.89□□□□□ -0.19
RFC3P40938 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.89□□□□□ -0.19
RFC3P40938 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.89□□□□□ -0.19
RFC3P40938 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RFC3P40938 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.89□□□□□ -0.19
RFC3P40938 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFC3P40938 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RFC3P40938 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.89□□□□□ -0.19
RFC3P40938 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFC3P40938 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
RFC3P40938 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFC3P40938 AL157414.3-201ENST00000624276 1954 ntBASIC13.89□□□□□ -0.19
RFC3P40938 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.89□□□□□ -0.19
RFC3P40938 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RFC3P40938 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFC3P40938 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFC3P40938 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RFC3P40938 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFC3P40938 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RFC3P40938 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
RFC3P40938 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.88□□□□□ -0.19
RFC3P40938 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RFC3P40938 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RFC3P40938 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.88□□□□□ -0.19
RFC3P40938 AP002414.2-201ENST00000591780 3365 ntBASIC13.88□□□□□ -0.19
RFC3P40938 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.88□□□□□ -0.19
RFC3P40938 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RFC3P40938 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
RFC3P40938 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RFC3P40938 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RFC3P40938 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RFC3P40938 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RFC3P40938 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.88□□□□□ -0.19
RFC3P40938 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.88□□□□□ -0.19
RFC3P40938 MIR326-201ENST00000362220 95 ntBASIC13.88□□□□□ -0.19
RFC3P40938 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC13.88□□□□□ -0.19
RFC3P40938 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.88□□□□□ -0.19
RFC3P40938 NUS1P3-201ENST00000423502 862 ntBASIC13.88□□□□□ -0.19
RFC3P40938 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC13.88□□□□□ -0.19
RFC3P40938 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC13.88□□□□□ -0.19
RFC3P40938 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC13.88□□□□□ -0.19
RFC3P40938 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.88□□□□□ -0.19
RFC3P40938 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC13.88□□□□□ -0.19
RFC3P40938 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.88□□□□□ -0.19
RFC3P40938 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.88□□□□□ -0.19
RFC3P40938 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
RFC3P40938 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.88□□□□□ -0.19
RFC3P40938 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RFC3P40938 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.88□□□□□ -0.19
RFC3P40938 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RFC3P40938 AC091271.1-201ENST00000611877 1162 ntBASIC13.88□□□□□ -0.19
RFC3P40938 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
RFC3P40938 AC132938.4-201ENST00000623835 848 ntBASIC13.88□□□□□ -0.19
RFC3P40938 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RFC3P40938 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RFC3P40938 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RFC3P40938 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RFC3P40938 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RFC3P40938 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
RFC3P40938 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RFC3P40938 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.88□□□□□ -0.19
RFC3P40938 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RFC3P40938 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.88□□□□□ -0.19
RFC3P40938 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.88□□□□□ -0.19
RFC3P40938 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RFC3P40938 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
RFC3P40938 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.88□□□□□ -0.19
RFC3P40938 GRK6P1-201ENST00000400595 1711 ntBASIC13.87□□□□□ -0.19
RFC3P40938 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
RFC3P40938 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.87□□□□□ -0.19
RFC3P40938 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RFC3P40938 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RFC3P40938 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
RFC3P40938 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RFC3P40938 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RFC3P40938 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
RFC3P40938 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RFC3P40938 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
RFC3P40938 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RFC3P40938 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RFC3P40938 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RFC3P40938 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.87□□□□□ -0.19
RFC3P40938 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RFC3P40938 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.87□□□□□ -0.19
RFC3P40938 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
RFC3P40938 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.87□□□□□ -0.19
RFC3P40938 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
RFC3P40938 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RFC3P40938 AL161772.1-201ENST00000610494 4412 ntBASIC13.87□□□□□ -0.19
RFC3P40938 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RFC3P40938 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RFC3P40938 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.87□□□□□ -0.19
RFC3P40938 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RFC3P40938 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RFC3P40938 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RFC3P40938 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
RFC3P40938 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RFC3P40938 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC13.87□□□□□ -0.19
RFC3P40938 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms