Protein–RNA interactions for Protein: P40227

CCT6A, T-complex protein 1 subunit zeta, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCT6AP40227 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCT6AP40227 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCT6AP40227 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC17.12■□□□□ 0.33
CCT6AP40227 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CCT6AP40227 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCT6AP40227 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CCT6AP40227 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCT6AP40227 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCT6AP40227 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC17.12■□□□□ 0.33
CCT6AP40227 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC17.12■□□□□ 0.33
CCT6AP40227 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCT6AP40227 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCT6AP40227 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCT6AP40227 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CCT6AP40227 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCT6AP40227 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
CCT6AP40227 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCT6AP40227 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCT6AP40227 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC17.11■□□□□ 0.33
CCT6AP40227 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCT6AP40227 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CCT6AP40227 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCT6AP40227 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC17.11■□□□□ 0.33
CCT6AP40227 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCT6AP40227 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCT6AP40227 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCT6AP40227 ACKR1-201ENST00000368121 1240 ntBASIC17.11■□□□□ 0.33
CCT6AP40227 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCT6AP40227 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCT6AP40227 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.11■□□□□ 0.33
CCT6AP40227 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC17.11■□□□□ 0.33
CCT6AP40227 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
CCT6AP40227 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCT6AP40227 AC114812.1-204ENST00000449669 728 ntBASIC17.11■□□□□ 0.33
CCT6AP40227 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC17.11■□□□□ 0.33
CCT6AP40227 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CCT6AP40227 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CCT6AP40227 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CCT6AP40227 TDH-203ENST00000531764 1110 ntBASIC17.11■□□□□ 0.33
CCT6AP40227 KSR1-207ENST00000578981 748 ntTSL 4 BASIC17.11■□□□□ 0.33
CCT6AP40227 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CCT6AP40227 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CCT6AP40227 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.11■□□□□ 0.33
CCT6AP40227 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC17.11■□□□□ 0.33
CCT6AP40227 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC17.11■□□□□ 0.33
CCT6AP40227 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCT6AP40227 AC007191.1-201ENST00000623179 2995 ntBASIC17.11■□□□□ 0.33
CCT6AP40227 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC17.11■□□□□ 0.33
CCT6AP40227 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCT6AP40227 LILRP1-201ENST00000444199 1370 ntBASIC17.11■□□□□ 0.33
CCT6AP40227 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC17.11■□□□□ 0.33
CCT6AP40227 CU639417.3-201ENST00000624240 1404 ntBASIC17.11■□□□□ 0.33
CCT6AP40227 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC17.11■□□□□ 0.33
CCT6AP40227 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CCT6AP40227 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCT6AP40227 CICP14-201ENST00000629111 2732 ntBASIC17.11■□□□□ 0.33
CCT6AP40227 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCT6AP40227 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCT6AP40227 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCT6AP40227 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC17.1■□□□□ 0.33
CCT6AP40227 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
CCT6AP40227 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCT6AP40227 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCT6AP40227 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCT6AP40227 MSTO2P-201ENST00000314835 1709 ntBASIC17.1■□□□□ 0.33
CCT6AP40227 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCT6AP40227 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CCT6AP40227 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCT6AP40227 MGST3-203ENST00000367885 680 ntTSL 2 BASIC17.1■□□□□ 0.33
CCT6AP40227 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC17.1■□□□□ 0.33
CCT6AP40227 COX5BP8-201ENST00000416911 349 ntBASIC17.1■□□□□ 0.33
CCT6AP40227 ACTG1P3-201ENST00000431775 1114 ntBASIC17.1■□□□□ 0.33
CCT6AP40227 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CCT6AP40227 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.1■□□□□ 0.33
CCT6AP40227 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC17.1■□□□□ 0.33
CCT6AP40227 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCT6AP40227 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC17.1■□□□□ 0.33
CCT6AP40227 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC17.1■□□□□ 0.33
CCT6AP40227 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CCT6AP40227 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCT6AP40227 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CCT6AP40227 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC17.1■□□□□ 0.33
CCT6AP40227 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC17.1■□□□□ 0.33
CCT6AP40227 MIR5189-201ENST00000577370 114 ntBASIC17.1■□□□□ 0.33
CCT6AP40227 AC132938.2-201ENST00000579188 680 ntBASIC17.1■□□□□ 0.33
CCT6AP40227 AL591163.1-201ENST00000641757 987 ntBASIC17.1■□□□□ 0.33
CCT6AP40227 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CCT6AP40227 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCT6AP40227 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC17.1■□□□□ 0.33
CCT6AP40227 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CCT6AP40227 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCT6AP40227 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCT6AP40227 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
CCT6AP40227 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCT6AP40227 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC17.1■□□□□ 0.33
CCT6AP40227 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCT6AP40227 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
CCT6AP40227 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CCT6AP40227 MIR600HG-201ENST00000449175 5984 ntBASIC17.09■□□□□ 0.33
CCT6AP40227 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 377.3 ms