Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM23P36406 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.83□□□□□ -0.04
TRIM23P36406 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC14.83□□□□□ -0.04
TRIM23P36406 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
TRIM23P36406 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.83□□□□□ -0.04
TRIM23P36406 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM23P36406 AC007969.1-201ENST00000433675 447 ntBASIC14.83□□□□□ -0.04
TRIM23P36406 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM23P36406 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.83□□□□□ -0.04
TRIM23P36406 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM23P36406 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM23P36406 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.83□□□□□ -0.04
TRIM23P36406 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
TRIM23P36406 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC14.83□□□□□ -0.04
TRIM23P36406 AL096828.3-201ENST00000615354 462 ntBASIC14.83□□□□□ -0.04
TRIM23P36406 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM23P36406 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.83□□□□□ -0.04
TRIM23P36406 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM23P36406 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
TRIM23P36406 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM23P36406 AC020907.1-201ENST00000616460 1350 ntBASIC14.83□□□□□ -0.04
TRIM23P36406 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.83□□□□□ -0.04
TRIM23P36406 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM23P36406 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.83□□□□□ -0.04
TRIM23P36406 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM23P36406 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM23P36406 AC006486.2-201ENST00000624246 2199 ntBASIC14.83□□□□□ -0.04
TRIM23P36406 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM23P36406 AC003102.2-201ENST00000589195 1469 ntBASIC14.82□□□□□ -0.04
TRIM23P36406 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TRIM23P36406 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.82□□□□□ -0.04
TRIM23P36406 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.82□□□□□ -0.04
TRIM23P36406 AC011840.2-201ENST00000563063 1520 ntBASIC14.82□□□□□ -0.04
TRIM23P36406 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM23P36406 ZBED1P1-201ENST00000502364 1930 ntBASIC14.82□□□□□ -0.04
TRIM23P36406 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM23P36406 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM23P36406 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM23P36406 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM23P36406 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
TRIM23P36406 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.82□□□□□ -0.04
TRIM23P36406 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM23P36406 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM23P36406 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM23P36406 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM23P36406 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TRIM23P36406 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM23P36406 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM23P36406 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM23P36406 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM23P36406 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM23P36406 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.82□□□□□ -0.04
TRIM23P36406 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
TRIM23P36406 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
TRIM23P36406 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM23P36406 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TRIM23P36406 HIST2H2BB-201ENST00000449108 381 ntBASIC14.82□□□□□ -0.04
TRIM23P36406 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC14.82□□□□□ -0.04
TRIM23P36406 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM23P36406 AC100850.1-201ENST00000506768 649 ntBASIC14.82□□□□□ -0.04
TRIM23P36406 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM23P36406 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.82□□□□□ -0.04
TRIM23P36406 EMC4-209ENST00000559421 497 ntTSL 2 BASIC14.82□□□□□ -0.04
TRIM23P36406 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC14.82□□□□□ -0.04
TRIM23P36406 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.82□□□□□ -0.04
TRIM23P36406 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.82□□□□□ -0.04
TRIM23P36406 AC104982.3-201ENST00000581995 514 ntBASIC14.82□□□□□ -0.04
TRIM23P36406 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.82□□□□□ -0.04
TRIM23P36406 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC14.82□□□□□ -0.04
TRIM23P36406 AC005695.3-201ENST00000614522 232 ntBASIC14.82□□□□□ -0.04
TRIM23P36406 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM23P36406 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
TRIM23P36406 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM23P36406 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM23P36406 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.82□□□□□ -0.04
TRIM23P36406 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM23P36406 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM23P36406 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM23P36406 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TRIM23P36406 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM23P36406 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM23P36406 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM23P36406 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM23P36406 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM23P36406 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM23P36406 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM23P36406 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TRIM23P36406 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM23P36406 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM23P36406 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TRIM23P36406 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM23P36406 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM23P36406 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM23P36406 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM23P36406 AC020910.5-201ENST00000623668 1865 ntBASIC14.81□□□□□ -0.04
TRIM23P36406 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TRIM23P36406 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.81□□□□□ -0.04
TRIM23P36406 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.81□□□□□ -0.04
TRIM23P36406 POM121L10P-201ENST00000436994 1285 ntBASIC14.81□□□□□ -0.04
TRIM23P36406 AC006033.1-201ENST00000440505 426 ntBASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms