Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
CKS2P33552 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
CKS2P33552 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
CKS2P33552 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC11.18□□□□□ -0.62
CKS2P33552 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CKS2P33552 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CKS2P33552 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
CKS2P33552 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CKS2P33552 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC11.18□□□□□ -0.62
CKS2P33552 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CKS2P33552 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
CKS2P33552 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
CKS2P33552 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC11.18□□□□□ -0.62
CKS2P33552 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
CKS2P33552 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC11.18□□□□□ -0.62
CKS2P33552 SAPCD2P3-201ENST00000455031 850 ntBASIC11.18□□□□□ -0.62
CKS2P33552 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC11.18□□□□□ -0.62
CKS2P33552 POLD4-207ENST00000531239 584 ntTSL 2 BASIC11.18□□□□□ -0.62
CKS2P33552 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC11.18□□□□□ -0.62
CKS2P33552 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC11.18□□□□□ -0.62
CKS2P33552 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC11.18□□□□□ -0.62
CKS2P33552 AC091304.2-201ENST00000564639 760 ntBASIC11.18□□□□□ -0.62
CKS2P33552 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
CKS2P33552 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC11.18□□□□□ -0.62
CKS2P33552 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC11.18□□□□□ -0.62
CKS2P33552 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC11.18□□□□□ -0.62
CKS2P33552 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CKS2P33552 AC007064.4-201ENST00000637740 555 ntBASIC11.18□□□□□ -0.62
CKS2P33552 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC11.18□□□□□ -0.62
CKS2P33552 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CKS2P33552 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC11.18□□□□□ -0.62
CKS2P33552 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
CKS2P33552 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
CKS2P33552 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC11.18□□□□□ -0.62
CKS2P33552 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CKS2P33552 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CKS2P33552 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
CKS2P33552 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CKS2P33552 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC11.18□□□□□ -0.62
CKS2P33552 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC11.18□□□□□ -0.62
CKS2P33552 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CKS2P33552 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CKS2P33552 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CKS2P33552 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC11.18□□□□□ -0.62
CKS2P33552 AP002414.3-201ENST00000589352 1468 ntBASIC11.18□□□□□ -0.62
CKS2P33552 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CKS2P33552 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC11.18□□□□□ -0.62
CKS2P33552 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC11.18□□□□□ -0.62
CKS2P33552 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CKS2P33552 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CKS2P33552 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
CKS2P33552 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CKS2P33552 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
CKS2P33552 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CKS2P33552 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CKS2P33552 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC11.17□□□□□ -0.62
CKS2P33552 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC11.17□□□□□ -0.62
CKS2P33552 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
CKS2P33552 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC11.17□□□□□ -0.62
CKS2P33552 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
CKS2P33552 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
CKS2P33552 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC11.17□□□□□ -0.62
CKS2P33552 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CKS2P33552 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CKS2P33552 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CKS2P33552 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
CKS2P33552 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CKS2P33552 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CKS2P33552 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CKS2P33552 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CKS2P33552 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
CKS2P33552 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC11.17□□□□□ -0.62
CKS2P33552 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CKS2P33552 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CKS2P33552 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CKS2P33552 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
CKS2P33552 AC136604.1-201ENST00000418535 575 ntBASIC11.17□□□□□ -0.62
CKS2P33552 ISCU-203ENST00000431221 799 ntTSL 2 BASIC11.17□□□□□ -0.62
CKS2P33552 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC11.17□□□□□ -0.62
CKS2P33552 EEF1DP4-201ENST00000446006 880 ntBASIC11.17□□□□□ -0.62
CKS2P33552 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC11.17□□□□□ -0.62
CKS2P33552 AC105233.2-201ENST00000523697 349 ntBASIC11.17□□□□□ -0.62
CKS2P33552 AF228730.5-201ENST00000530288 346 ntBASIC11.17□□□□□ -0.62
CKS2P33552 AL049597.2-201ENST00000565575 961 ntBASIC11.17□□□□□ -0.62
CKS2P33552 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC11.17□□□□□ -0.62
CKS2P33552 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CKS2P33552 AC026979.3-201ENST00000607315 403 ntBASIC11.17□□□□□ -0.62
CKS2P33552 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC11.17□□□□□ -0.62
CKS2P33552 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CKS2P33552 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CKS2P33552 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
CKS2P33552 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CKS2P33552 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CKS2P33552 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CKS2P33552 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC11.17□□□□□ -0.62
CKS2P33552 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
CKS2P33552 AC130686.1-201ENST00000622936 2466 ntBASIC11.17□□□□□ -0.62
CKS2P33552 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
CKS2P33552 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CKS2P33552 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC11.17□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms