Protein–RNA interactions for Protein: P30926

CHRNB4, Neuronal acetylcholine receptor subunit beta-4, humanhuman

Predictions only

Length 498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4P30926 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CHRNB4P30926 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.42□□□□□ -0.26
CHRNB4P30926 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CHRNB4P30926 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC13.42□□□□□ -0.26
CHRNB4P30926 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CHRNB4P30926 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CHRNB4P30926 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CHRNB4P30926 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC13.42□□□□□ -0.26
CHRNB4P30926 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CHRNB4P30926 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC13.42□□□□□ -0.26
CHRNB4P30926 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CHRNB4P30926 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.42□□□□□ -0.26
CHRNB4P30926 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CHRNB4P30926 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CHRNB4P30926 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CHRNB4P30926 KRT8P4-201ENST00000509735 1454 ntBASIC13.42□□□□□ -0.26
CHRNB4P30926 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.41□□□□□ -0.26
CHRNB4P30926 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CHRNB4P30926 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CHRNB4P30926 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CHRNB4P30926 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CHRNB4P30926 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CHRNB4P30926 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CHRNB4P30926 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CHRNB4P30926 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CHRNB4P30926 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CHRNB4P30926 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CHRNB4P30926 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CHRNB4P30926 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CHRNB4P30926 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
CHRNB4P30926 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
CHRNB4P30926 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CHRNB4P30926 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CHRNB4P30926 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CHRNB4P30926 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CHRNB4P30926 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CHRNB4P30926 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CHRNB4P30926 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CHRNB4P30926 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CHRNB4P30926 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC13.41□□□□□ -0.26
CHRNB4P30926 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
CHRNB4P30926 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CHRNB4P30926 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CHRNB4P30926 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC13.41□□□□□ -0.26
CHRNB4P30926 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CHRNB4P30926 POM121L8P-201ENST00000417732 1281 ntBASIC13.41□□□□□ -0.26
CHRNB4P30926 KRTAP19-9P-201ENST00000421795 191 ntBASIC13.41□□□□□ -0.26
CHRNB4P30926 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CHRNB4P30926 RGS5-214ENST00000429865 754 ntTSL 3 BASIC13.41□□□□□ -0.26
CHRNB4P30926 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.41□□□□□ -0.26
CHRNB4P30926 POM121L9P-203ENST00000441984 1285 ntBASIC13.41□□□□□ -0.26
CHRNB4P30926 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC13.41□□□□□ -0.26
CHRNB4P30926 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CHRNB4P30926 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CHRNB4P30926 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC13.41□□□□□ -0.26
CHRNB4P30926 HCG18-245ENST00000602550 559 ntTSL 4 BASIC13.41□□□□□ -0.26
CHRNB4P30926 AC073413.1-201ENST00000603927 732 ntBASIC13.41□□□□□ -0.26
CHRNB4P30926 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CHRNB4P30926 CU633904.3-201ENST00000624042 1029 ntBASIC13.41□□□□□ -0.26
CHRNB4P30926 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.41□□□□□ -0.26
CHRNB4P30926 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CHRNB4P30926 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CHRNB4P30926 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CHRNB4P30926 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CHRNB4P30926 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CHRNB4P30926 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC13.41□□□□□ -0.26
CHRNB4P30926 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CHRNB4P30926 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CHRNB4P30926 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CHRNB4P30926 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CHRNB4P30926 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHRNB4P30926 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CHRNB4P30926 AC026691.1-201ENST00000602502 2017 ntBASIC13.4□□□□□ -0.26
CHRNB4P30926 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CHRNB4P30926 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHRNB4P30926 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CHRNB4P30926 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.4□□□□□ -0.26
CHRNB4P30926 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHRNB4P30926 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHRNB4P30926 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CHRNB4P30926 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CHRNB4P30926 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHRNB4P30926 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CHRNB4P30926 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHRNB4P30926 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CHRNB4P30926 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
CHRNB4P30926 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHRNB4P30926 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
CHRNB4P30926 AL136309.1-201ENST00000403917 691 ntBASIC13.4□□□□□ -0.26
CHRNB4P30926 RPL5P21-201ENST00000404620 815 ntBASIC13.4□□□□□ -0.26
CHRNB4P30926 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CHRNB4P30926 DEF8-202ENST00000418391 852 ntTSL 2 BASIC13.4□□□□□ -0.26
CHRNB4P30926 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC13.4□□□□□ -0.26
CHRNB4P30926 AL133466.1-201ENST00000447582 150 ntBASIC13.4□□□□□ -0.26
CHRNB4P30926 RN7SL769P-201ENST00000469386 295 ntBASIC13.4□□□□□ -0.26
CHRNB4P30926 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CHRNB4P30926 FTLP10-202ENST00000505798 471 ntBASIC13.4□□□□□ -0.26
CHRNB4P30926 AL391280.1-201ENST00000506969 1062 ntBASIC13.4□□□□□ -0.26
CHRNB4P30926 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC13.4□□□□□ -0.26
CHRNB4P30926 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms