Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
SHC1P29353 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.91□□□□□ -0.18
SHC1P29353 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHC1P29353 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHC1P29353 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.91□□□□□ -0.18
SHC1P29353 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.91□□□□□ -0.18
SHC1P29353 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHC1P29353 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.91□□□□□ -0.18
SHC1P29353 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHC1P29353 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
SHC1P29353 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHC1P29353 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHC1P29353 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
SHC1P29353 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHC1P29353 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SHC1P29353 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.91□□□□□ -0.18
SHC1P29353 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHC1P29353 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHC1P29353 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHC1P29353 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
SHC1P29353 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHC1P29353 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.9□□□□□ -0.18
SHC1P29353 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
SHC1P29353 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.9□□□□□ -0.18
SHC1P29353 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHC1P29353 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.9□□□□□ -0.18
SHC1P29353 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHC1P29353 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHC1P29353 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SHC1P29353 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SHC1P29353 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHC1P29353 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHC1P29353 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
SHC1P29353 CICP14-201ENST00000629111 2732 ntBASIC13.9□□□□□ -0.18
SHC1P29353 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHC1P29353 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.9□□□□□ -0.18
SHC1P29353 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHC1P29353 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.9□□□□□ -0.18
SHC1P29353 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SHC1P29353 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHC1P29353 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC13.9□□□□□ -0.18
SHC1P29353 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
SHC1P29353 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC13.9□□□□□ -0.18
SHC1P29353 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHC1P29353 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SHC1P29353 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.9□□□□□ -0.18
SHC1P29353 PNKD-204ENST00000436005 978 ntTSL 5 BASIC13.9□□□□□ -0.18
SHC1P29353 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
SHC1P29353 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SHC1P29353 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.9□□□□□ -0.18
SHC1P29353 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC13.9□□□□□ -0.18
SHC1P29353 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.9□□□□□ -0.18
SHC1P29353 CECR7-204ENST00000609932 568 ntTSL 2 BASIC13.9□□□□□ -0.18
SHC1P29353 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
SHC1P29353 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.9□□□□□ -0.18
SHC1P29353 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
SHC1P29353 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC13.9□□□□□ -0.18
SHC1P29353 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.9□□□□□ -0.18
SHC1P29353 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHC1P29353 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SHC1P29353 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHC1P29353 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.9□□□□□ -0.18
SHC1P29353 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHC1P29353 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
SHC1P29353 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
SHC1P29353 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SHC1P29353 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SHC1P29353 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
SHC1P29353 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHC1P29353 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHC1P29353 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SHC1P29353 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SHC1P29353 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.9□□□□□ -0.18
SHC1P29353 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHC1P29353 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHC1P29353 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.9□□□□□ -0.18
SHC1P29353 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.9□□□□□ -0.18
SHC1P29353 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
SHC1P29353 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
SHC1P29353 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
SHC1P29353 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC13.9□□□□□ -0.19
SHC1P29353 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
SHC1P29353 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
SHC1P29353 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SHC1P29353 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SHC1P29353 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
SHC1P29353 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
SHC1P29353 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SHC1P29353 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
SHC1P29353 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
SHC1P29353 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SHC1P29353 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SHC1P29353 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.89□□□□□ -0.19
SHC1P29353 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.89□□□□□ -0.19
SHC1P29353 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SHC1P29353 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SHC1P29353 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SHC1P29353 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.89□□□□□ -0.19
SHC1P29353 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SHC1P29353 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms