Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KCNA3P22001 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.14■□□□□ 0.49
KCNA3P22001 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KCNA3P22001 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
KCNA3P22001 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KCNA3P22001 ACE-203ENST00000413513 2237 ntTSL 2 BASIC18.14■□□□□ 0.49
KCNA3P22001 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
KCNA3P22001 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
KCNA3P22001 SUPT20HL2-201ENST00000486479 2409 ntBASIC18.13■□□□□ 0.49
KCNA3P22001 AL672207.1-201ENST00000328462 1570 ntBASIC18.13■□□□□ 0.49
KCNA3P22001 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
KCNA3P22001 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.13■□□□□ 0.49
KCNA3P22001 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
KCNA3P22001 AL603832.2-201ENST00000566195 2125 ntBASIC18.13■□□□□ 0.49
KCNA3P22001 AC023090.2-201ENST00000625182 2110 ntBASIC18.13■□□□□ 0.49
KCNA3P22001 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KCNA3P22001 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
KCNA3P22001 SALL4P5-201ENST00000419001 1760 ntBASIC18.13■□□□□ 0.49
KCNA3P22001 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KCNA3P22001 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
KCNA3P22001 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
KCNA3P22001 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KCNA3P22001 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC18.13■□□□□ 0.49
KCNA3P22001 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC18.13■□□□□ 0.49
KCNA3P22001 AL512306.1-201ENST00000432698 848 ntBASIC18.13■□□□□ 0.49
KCNA3P22001 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC18.13■□□□□ 0.49
KCNA3P22001 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC18.13■□□□□ 0.49
KCNA3P22001 PPIA-208ENST00000489459 907 ntTSL 2 BASIC18.13■□□□□ 0.49
KCNA3P22001 RPS23-204ENST00000507980 836 ntTSL 2 BASIC18.13■□□□□ 0.49
KCNA3P22001 AC093826.1-201ENST00000508655 993 ntBASIC18.13■□□□□ 0.49
KCNA3P22001 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC18.13■□□□□ 0.49
KCNA3P22001 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC18.13■□□□□ 0.49
KCNA3P22001 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC18.13■□□□□ 0.49
KCNA3P22001 AP000322.3-201ENST00000608665 388 ntBASIC18.13■□□□□ 0.49
KCNA3P22001 PPIA-210ENST00000620047 827 ntTSL 5 BASIC18.13■□□□□ 0.49
KCNA3P22001 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC18.13■□□□□ 0.49
KCNA3P22001 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
KCNA3P22001 AC002044.2-201ENST00000624910 970 ntBASIC18.13■□□□□ 0.49
KCNA3P22001 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.13■□□□□ 0.49
KCNA3P22001 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KCNA3P22001 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KCNA3P22001 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KCNA3P22001 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC18.13■□□□□ 0.49
KCNA3P22001 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
KCNA3P22001 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC18.13■□□□□ 0.49
KCNA3P22001 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KCNA3P22001 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC18.12■□□□□ 0.49
KCNA3P22001 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC18.12■□□□□ 0.49
KCNA3P22001 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
KCNA3P22001 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
KCNA3P22001 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
KCNA3P22001 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
KCNA3P22001 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
KCNA3P22001 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC18.12■□□□□ 0.49
KCNA3P22001 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC18.12■□□□□ 0.49
KCNA3P22001 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KCNA3P22001 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
KCNA3P22001 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
KCNA3P22001 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
KCNA3P22001 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
KCNA3P22001 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
KCNA3P22001 AL357373.1-201ENST00000394974 322 ntBASIC18.12■□□□□ 0.49
KCNA3P22001 HNRNPA1P27-201ENST00000412087 955 ntBASIC18.12■□□□□ 0.49
KCNA3P22001 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC18.12■□□□□ 0.49
KCNA3P22001 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC18.12■□□□□ 0.49
KCNA3P22001 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
KCNA3P22001 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC18.12■□□□□ 0.49
KCNA3P22001 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC18.12■□□□□ 0.49
KCNA3P22001 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC18.12■□□□□ 0.49
KCNA3P22001 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC18.12■□□□□ 0.49
KCNA3P22001 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
KCNA3P22001 FAM90A21P-201ENST00000510875 1396 ntBASIC18.12■□□□□ 0.49
KCNA3P22001 FAM90A15P-201ENST00000514465 1395 ntBASIC18.12■□□□□ 0.49
KCNA3P22001 FAM90A6P-201ENST00000515148 1394 ntBASIC18.12■□□□□ 0.49
KCNA3P22001 FAM90A16P-201ENST00000526662 1395 ntBASIC18.12■□□□□ 0.49
KCNA3P22001 FAM90A9P-201ENST00000527940 1395 ntBASIC18.12■□□□□ 0.49
KCNA3P22001 FAM90A5P-201ENST00000528738 1395 ntBASIC18.12■□□□□ 0.49
KCNA3P22001 FAM90A14P-201ENST00000530386 1395 ntBASIC18.12■□□□□ 0.49
KCNA3P22001 FAM90A13P-201ENST00000534703 1395 ntBASIC18.12■□□□□ 0.49
KCNA3P22001 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KCNA3P22001 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.12■□□□□ 0.49
KCNA3P22001 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KCNA3P22001 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
KCNA3P22001 AC021305.1-201ENST00000520656 1514 ntBASIC18.12■□□□□ 0.49
KCNA3P22001 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KCNA3P22001 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
KCNA3P22001 CICP13-201ENST00000422015 2789 ntBASIC18.12■□□□□ 0.49
KCNA3P22001 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KCNA3P22001 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KCNA3P22001 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC18.12■□□□□ 0.49
KCNA3P22001 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.12■□□□□ 0.49
KCNA3P22001 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
KCNA3P22001 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KCNA3P22001 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
KCNA3P22001 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
KCNA3P22001 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
KCNA3P22001 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KCNA3P22001 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
KCNA3P22001 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
KCNA3P22001 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms