Protein–RNA interactions for Protein: P13631

RARG, Retinoic acid receptor gamma, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARGP13631 AL008721.1-201ENST00000609964 604 ntBASIC16.08■□□□□ 0.16
RARGP13631 AP005019.2-201ENST00000615104 511 ntBASIC16.08■□□□□ 0.16
RARGP13631 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RARGP13631 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RARGP13631 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RARGP13631 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RARGP13631 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RARGP13631 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RARGP13631 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RARGP13631 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
RARGP13631 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RARGP13631 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
RARGP13631 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
RARGP13631 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
RARGP13631 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
RARGP13631 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RARGP13631 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
RARGP13631 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.08■□□□□ 0.16
RARGP13631 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RARGP13631 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RARGP13631 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC16.08■□□□□ 0.16
RARGP13631 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RARGP13631 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.08■□□□□ 0.16
RARGP13631 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
RARGP13631 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
RARGP13631 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RARGP13631 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RARGP13631 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RARGP13631 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RARGP13631 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
RARGP13631 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RARGP13631 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
RARGP13631 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RARGP13631 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RARGP13631 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RARGP13631 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
RARGP13631 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
RARGP13631 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.07■□□□□ 0.16
RARGP13631 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.07■□□□□ 0.16
RARGP13631 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC16.07■□□□□ 0.16
RARGP13631 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC16.07■□□□□ 0.16
RARGP13631 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
RARGP13631 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RARGP13631 AL645728.2-202ENST00000641679 227 ntBASIC16.07■□□□□ 0.16
RARGP13631 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RARGP13631 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.07■□□□□ 0.16
RARGP13631 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RARGP13631 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RARGP13631 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
RARGP13631 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RARGP13631 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.07■□□□□ 0.16
RARGP13631 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC16.07■□□□□ 0.16
RARGP13631 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RARGP13631 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.07■□□□□ 0.16
RARGP13631 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RARGP13631 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RARGP13631 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RARGP13631 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RARGP13631 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
RARGP13631 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.06■□□□□ 0.16
RARGP13631 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RARGP13631 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
RARGP13631 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.06■□□□□ 0.16
RARGP13631 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.06■□□□□ 0.16
RARGP13631 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
RARGP13631 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
RARGP13631 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RARGP13631 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
RARGP13631 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RARGP13631 AC007787.1-201ENST00000588095 1583 ntBASIC16.06■□□□□ 0.16
RARGP13631 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.06■□□□□ 0.16
RARGP13631 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RARGP13631 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RARGP13631 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RARGP13631 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
RARGP13631 AC093525.8-201ENST00000624099 1342 ntBASIC16.06■□□□□ 0.16
RARGP13631 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RARGP13631 AC092933.1-201ENST00000393644 945 ntBASIC16.06■□□□□ 0.16
RARGP13631 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.06■□□□□ 0.16
RARGP13631 MIR1909-201ENST00000411312 80 ntBASIC16.06■□□□□ 0.16
RARGP13631 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
RARGP13631 AC106760.1-201ENST00000508690 800 ntBASIC16.06■□□□□ 0.16
RARGP13631 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC16.06■□□□□ 0.16
RARGP13631 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.06■□□□□ 0.16
RARGP13631 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC16.06■□□□□ 0.16
RARGP13631 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.06■□□□□ 0.16
RARGP13631 AL359881.2-201ENST00000602973 570 ntBASIC16.06■□□□□ 0.16
RARGP13631 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RARGP13631 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC16.06■□□□□ 0.16
RARGP13631 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
RARGP13631 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RARGP13631 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RARGP13631 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
RARGP13631 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RARGP13631 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RARGP13631 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
RARGP13631 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RARGP13631 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RARGP13631 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.06■□□□□ 0.16
RARGP13631 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms